Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
CASC1Q6TDU7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CASC1Q6TDU7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.09■■□□□ 1.61
CASC1Q6TDU7 DUX4L2-201ENST00000561772 1275 ntBASIC25.09■■□□□ 1.61
CASC1Q6TDU7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.09■■□□□ 1.61
CASC1Q6TDU7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.09■■□□□ 1.61
CASC1Q6TDU7 DUX4L6-201ENST00000626483 1275 ntBASIC25.09■■□□□ 1.61
CASC1Q6TDU7 DUX4L1-201ENST00000627662 1275 ntBASIC25.09■■□□□ 1.61
CASC1Q6TDU7 DUX4L8-201ENST00000629013 1275 ntBASIC25.09■■□□□ 1.61
CASC1Q6TDU7 DUX4L3-201ENST00000630187 1275 ntBASIC25.09■■□□□ 1.61
CASC1Q6TDU7 DUX4L7-201ENST00000630678 1275 ntBASIC25.09■■□□□ 1.61
CASC1Q6TDU7 DUX4L5-201ENST00000630834 1275 ntBASIC25.09■■□□□ 1.61
CASC1Q6TDU7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CASC1Q6TDU7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC25.09■■□□□ 1.61
CASC1Q6TDU7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CASC1Q6TDU7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CASC1Q6TDU7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC25.08■■□□□ 1.61
CASC1Q6TDU7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CASC1Q6TDU7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CASC1Q6TDU7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC25.08■■□□□ 1.61
CASC1Q6TDU7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.08■■□□□ 1.61
CASC1Q6TDU7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CASC1Q6TDU7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC25.08■■□□□ 1.61
CASC1Q6TDU7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CASC1Q6TDU7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC25.08■■□□□ 1.6
CASC1Q6TDU7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CASC1Q6TDU7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CASC1Q6TDU7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
CASC1Q6TDU7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CASC1Q6TDU7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC25.07■■□□□ 1.6
CASC1Q6TDU7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CASC1Q6TDU7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
CASC1Q6TDU7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
CASC1Q6TDU7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CASC1Q6TDU7 AC020907.5-201ENST00000624372 1936 ntBASIC25.07■■□□□ 1.6
CASC1Q6TDU7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CASC1Q6TDU7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.07■■□□□ 1.6
CASC1Q6TDU7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CASC1Q6TDU7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CASC1Q6TDU7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC25.07■■□□□ 1.6
CASC1Q6TDU7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CASC1Q6TDU7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CASC1Q6TDU7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.06■■□□□ 1.6
CASC1Q6TDU7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.06■■□□□ 1.6
CASC1Q6TDU7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.06■■□□□ 1.6
CASC1Q6TDU7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CASC1Q6TDU7 AC104187.1-201ENST00000607510 612 ntBASIC25.06■■□□□ 1.6
CASC1Q6TDU7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC25.06■■□□□ 1.6
CASC1Q6TDU7 RARRES2P11-201ENST00000635158 484 ntBASIC25.06■■□□□ 1.6
CASC1Q6TDU7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CASC1Q6TDU7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CASC1Q6TDU7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CASC1Q6TDU7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.06■■□□□ 1.6
CASC1Q6TDU7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC25.05■■□□□ 1.6
CASC1Q6TDU7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CASC1Q6TDU7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC25.04■■□□□ 1.6
CASC1Q6TDU7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CASC1Q6TDU7 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
CASC1Q6TDU7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC25.04■■□□□ 1.6
CASC1Q6TDU7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25.04■■□□□ 1.6
CASC1Q6TDU7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.04■■□□□ 1.6
CASC1Q6TDU7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CASC1Q6TDU7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CASC1Q6TDU7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CASC1Q6TDU7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CASC1Q6TDU7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
CASC1Q6TDU7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
CASC1Q6TDU7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
CASC1Q6TDU7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CASC1Q6TDU7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
CASC1Q6TDU7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
CASC1Q6TDU7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
CASC1Q6TDU7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CASC1Q6TDU7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CASC1Q6TDU7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CASC1Q6TDU7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CASC1Q6TDU7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC25.03■■□□□ 1.6
CASC1Q6TDU7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CASC1Q6TDU7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CASC1Q6TDU7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CASC1Q6TDU7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CASC1Q6TDU7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CASC1Q6TDU7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms