Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CTSL3PQ5NE16 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 DUX4L16-201ENST00000555130 1264 ntBASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CTSL3PQ5NE16 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTSL3PQ5NE16 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTSL3PQ5NE16 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTSL3PQ5NE16 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSL3PQ5NE16 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSL3PQ5NE16 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSL3PQ5NE16 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.28■□□□□ 0.84
CTSL3PQ5NE16 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTSL3PQ5NE16 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTSL3PQ5NE16 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
CTSL3PQ5NE16 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTSL3PQ5NE16 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CTSL3PQ5NE16 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CTSL3PQ5NE16 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 LINC01521-201ENST00000504184 1943 ntBASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 CNN2P6-201ENST00000439038 900 ntBASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 AC007322.4-201ENST00000509611 723 ntBASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 AC092437.1-201ENST00000624794 1048 ntBASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 MIR2861-201ENST00000636310 90 ntBASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 AC013268.1-206ENST00000638368 961 ntBASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 AC112229.1-201ENST00000639295 961 ntBASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTSL3PQ5NE16 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CTSL3PQ5NE16 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CTSL3PQ5NE16 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CTSL3PQ5NE16 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CTSL3PQ5NE16 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CTSL3PQ5NE16 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.27■□□□□ 0.83
CTSL3PQ5NE16 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.27■□□□□ 0.83
CTSL3PQ5NE16 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CTSL3PQ5NE16 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.26■□□□□ 0.83
CTSL3PQ5NE16 GABARAPL3-202ENST00000624044 1851 ntBASIC20.26■□□□□ 0.83
CTSL3PQ5NE16 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTSL3PQ5NE16 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.26■□□□□ 0.83
CTSL3PQ5NE16 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTSL3PQ5NE16 CDV3P1-201ENST00000471403 739 ntBASIC20.26■□□□□ 0.83
CTSL3PQ5NE16 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.26■□□□□ 0.83
CTSL3PQ5NE16 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.26■□□□□ 0.83
CTSL3PQ5NE16 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.26■□□□□ 0.83
CTSL3PQ5NE16 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CTSL3PQ5NE16 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.26■□□□□ 0.83
CTSL3PQ5NE16 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTSL3PQ5NE16 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms