Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH13P55290 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH13P55290 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH13P55290 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH13P55290 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH13P55290 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH13P55290 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
CDH13P55290 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH13P55290 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH13P55290 AL512408.1-201ENST00000569378 2000 ntBASIC20.09■□□□□ 0.81
CDH13P55290 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH13P55290 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH13P55290 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH13P55290 AC027612.3-201ENST00000413684 1047 ntBASIC20.09■□□□□ 0.81
CDH13P55290 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH13P55290 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH13P55290 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.09■□□□□ 0.81
CDH13P55290 RARRES2P11-201ENST00000635158 484 ntBASIC20.09■□□□□ 0.81
CDH13P55290 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH13P55290 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH13P55290 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.09■□□□□ 0.81
CDH13P55290 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.09■□□□□ 0.81
CDH13P55290 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH13P55290 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH13P55290 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH13P55290 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CDH13P55290 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.08■□□□□ 0.81
CDH13P55290 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDH13P55290 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH13P55290 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
CDH13P55290 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDH13P55290 AL121603.2-201ENST00000557373 2117 ntBASIC20.08■□□□□ 0.81
CDH13P55290 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH13P55290 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDH13P55290 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH13P55290 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.08■□□□□ 0.81
CDH13P55290 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDH13P55290 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH13P55290 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH13P55290 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH13P55290 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CDH13P55290 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CDH13P55290 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CDH13P55290 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.08■□□□□ 0.8
CDH13P55290 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDH13P55290 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CDH13P55290 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.08■□□□□ 0.8
CDH13P55290 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH13P55290 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH13P55290 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH13P55290 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH13P55290 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH13P55290 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.07■□□□□ 0.8
CDH13P55290 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.07■□□□□ 0.8
CDH13P55290 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH13P55290 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH13P55290 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH13P55290 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH13P55290 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH13P55290 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH13P55290 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH13P55290 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH13P55290 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CDH13P55290 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CDH13P55290 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH13P55290 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH13P55290 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.06■□□□□ 0.8
CDH13P55290 AFG3L1P-217ENST00000557444 2447 ntBASIC20.06■□□□□ 0.8
CDH13P55290 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH13P55290 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CDH13P55290 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CDH13P55290 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH13P55290 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH13P55290 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH13P55290 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH13P55290 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH13P55290 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH13P55290 MIR638-201ENST00000385237 100 ntBASIC20.06■□□□□ 0.8
CDH13P55290 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.06■□□□□ 0.8
CDH13P55290 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.06■□□□□ 0.8
CDH13P55290 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDH13P55290 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CDH13P55290 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH13P55290 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH13P55290 LINC02228-203ENST00000641970 1355 ntBASIC20.06■□□□□ 0.8
CDH13P55290 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH13P55290 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH13P55290 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CDH13P55290 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH13P55290 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH13P55290 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH13P55290 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.05■□□□□ 0.8
CDH13P55290 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH13P55290 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH13P55290 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH13P55290 AC104187.1-201ENST00000607510 612 ntBASIC20.05■□□□□ 0.8
CDH13P55290 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.05■□□□□ 0.8
CDH13P55290 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDH13P55290 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDH13P55290 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms