Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.08■□□□□ 0.97
CDH4P55283 AC092118.2-201ENST00000613495 667 ntBASIC21.08■□□□□ 0.97
CDH4P55283 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.08■□□□□ 0.97
CDH4P55283 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.08■□□□□ 0.97
CDH4P55283 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
CDH4P55283 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDH4P55283 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDH4P55283 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDH4P55283 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CDH4P55283 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CDH4P55283 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.08■□□□□ 0.96
CDH4P55283 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CDH4P55283 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.08■□□□□ 0.96
CDH4P55283 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDH4P55283 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDH4P55283 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH4P55283 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.07■□□□□ 0.96
CDH4P55283 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.07■□□□□ 0.96
CDH4P55283 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH4P55283 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH4P55283 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.07■□□□□ 0.96
CDH4P55283 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.07■□□□□ 0.96
CDH4P55283 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
CDH4P55283 AC133041.1-202ENST00000642053 222 ntBASIC21.07■□□□□ 0.96
CDH4P55283 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH4P55283 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.07■□□□□ 0.96
CDH4P55283 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDH4P55283 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.07■□□□□ 0.96
CDH4P55283 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH4P55283 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDH4P55283 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDH4P55283 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.07■□□□□ 0.96
CDH4P55283 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CDH4P55283 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH4P55283 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH4P55283 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CDH4P55283 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH4P55283 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH4P55283 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.06■□□□□ 0.96
CDH4P55283 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH4P55283 KRT18P68-201ENST00000392293 1000 ntBASIC21.06■□□□□ 0.96
CDH4P55283 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.06■□□□□ 0.96
CDH4P55283 AC069152.1-201ENST00000438030 544 ntBASIC21.06■□□□□ 0.96
CDH4P55283 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.06■□□□□ 0.96
CDH4P55283 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.06■□□□□ 0.96
CDH4P55283 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.06■□□□□ 0.96
CDH4P55283 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
CDH4P55283 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.06■□□□□ 0.96
CDH4P55283 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH4P55283 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.06■□□□□ 0.96
CDH4P55283 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDH4P55283 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDH4P55283 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.06■□□□□ 0.96
CDH4P55283 AC087633.2-202ENST00000565166 1439 ntBASIC21.05■□□□□ 0.96
CDH4P55283 KRT17P1-201ENST00000399211 1546 ntBASIC21.05■□□□□ 0.96
CDH4P55283 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CDH4P55283 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.05■□□□□ 0.96
CDH4P55283 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CDH4P55283 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH4P55283 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CDH4P55283 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH4P55283 LSM12P1-201ENST00000411836 588 ntBASIC21.05■□□□□ 0.96
CDH4P55283 PGM5P4-201ENST00000421970 445 ntBASIC21.05■□□□□ 0.96
CDH4P55283 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.05■□□□□ 0.96
CDH4P55283 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH4P55283 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.05■□□□□ 0.96
CDH4P55283 AL589743.5-201ENST00000616611 1050 ntBASIC21.05■□□□□ 0.96
CDH4P55283 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH4P55283 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.05■□□□□ 0.96
CDH4P55283 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDH4P55283 AC027702.1-201ENST00000563810 1770 ntBASIC21.05■□□□□ 0.96
CDH4P55283 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
CDH4P55283 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.04■□□□□ 0.96
CDH4P55283 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CDH4P55283 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH4P55283 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH4P55283 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH4P55283 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.04■□□□□ 0.96
CDH4P55283 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.04■□□□□ 0.96
CDH4P55283 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.04■□□□□ 0.96
CDH4P55283 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.04■□□□□ 0.96
CDH4P55283 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
CDH4P55283 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.04■□□□□ 0.96
CDH4P55283 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH4P55283 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.04■□□□□ 0.96
CDH4P55283 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CDH4P55283 AC007375.3-201ENST00000600936 2314 ntBASIC21.04■□□□□ 0.96
CDH4P55283 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.04■□□□□ 0.96
CDH4P55283 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CDH4P55283 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH4P55283 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CDH4P55283 AC005229.4-201ENST00000610085 2198 ntBASIC21.03■□□□□ 0.96
CDH4P55283 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH4P55283 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH4P55283 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH4P55283 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH4P55283 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CDH4P55283 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CDH4P55283 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CDH4P55283 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms