Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CACNA2D1P54289 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.81■■□□□ 1.08
CACNA2D1P54289 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CACNA2D1P54289 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.81■■□□□ 1.08
CACNA2D1P54289 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.81■■□□□ 1.08
CACNA2D1P54289 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CACNA2D1P54289 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CACNA2D1P54289 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CACNA2D1P54289 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.81■■□□□ 1.08
CACNA2D1P54289 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CACNA2D1P54289 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
CACNA2D1P54289 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.8■■□□□ 1.08
CACNA2D1P54289 AC116050.2-201ENST00000612102 1779 ntBASIC21.8■■□□□ 1.08
CACNA2D1P54289 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CACNA2D1P54289 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.8■■□□□ 1.08
CACNA2D1P54289 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CACNA2D1P54289 AC069152.1-201ENST00000438030 544 ntBASIC21.8■■□□□ 1.08
CACNA2D1P54289 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.8■■□□□ 1.08
CACNA2D1P54289 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.8■■□□□ 1.08
CACNA2D1P54289 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.8■■□□□ 1.08
CACNA2D1P54289 PKD1P6-201ENST00000343738 4769 ntBASIC21.8■■□□□ 1.08
CACNA2D1P54289 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CACNA2D1P54289 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CACNA2D1P54289 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CACNA2D1P54289 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CACNA2D1P54289 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CACNA2D1P54289 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CACNA2D1P54289 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.79■■□□□ 1.08
CACNA2D1P54289 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.79■■□□□ 1.08
CACNA2D1P54289 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.79■■□□□ 1.08
CACNA2D1P54289 KRT17P1-201ENST00000399211 1546 ntBASIC21.79■■□□□ 1.08
CACNA2D1P54289 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.79■■□□□ 1.08
CACNA2D1P54289 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CACNA2D1P54289 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CACNA2D1P54289 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CACNA2D1P54289 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.78■■□□□ 1.08
CACNA2D1P54289 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CACNA2D1P54289 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.78■■□□□ 1.08
CACNA2D1P54289 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CACNA2D1P54289 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CACNA2D1P54289 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.78■■□□□ 1.08
CACNA2D1P54289 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.78■■□□□ 1.08
CACNA2D1P54289 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CACNA2D1P54289 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CACNA2D1P54289 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CACNA2D1P54289 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.78■■□□□ 1.08
CACNA2D1P54289 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CACNA2D1P54289 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CACNA2D1P54289 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CACNA2D1P54289 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA2D1P54289 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA2D1P54289 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CACNA2D1P54289 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.77■■□□□ 1.08
CACNA2D1P54289 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
CACNA2D1P54289 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.77■■□□□ 1.08
CACNA2D1P54289 AL049796.1-201ENST00000565336 1766 ntBASIC21.77■■□□□ 1.08
CACNA2D1P54289 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA2D1P54289 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA2D1P54289 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CACNA2D1P54289 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CACNA2D1P54289 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.77■■□□□ 1.08
CACNA2D1P54289 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CACNA2D1P54289 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CACNA2D1P54289 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CACNA2D1P54289 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
CACNA2D1P54289 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CACNA2D1P54289 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.76■■□□□ 1.07
CACNA2D1P54289 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA2D1P54289 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CACNA2D1P54289 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.76■■□□□ 1.07
CACNA2D1P54289 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CACNA2D1P54289 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA2D1P54289 AC073210.2-201ENST00000430369 194 ntBASIC21.76■■□□□ 1.07
CACNA2D1P54289 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.76■■□□□ 1.07
CACNA2D1P54289 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.76■■□□□ 1.07
CACNA2D1P54289 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.76■■□□□ 1.07
CACNA2D1P54289 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.76■■□□□ 1.07
CACNA2D1P54289 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA2D1P54289 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.76■■□□□ 1.07
CACNA2D1P54289 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CACNA2D1P54289 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.76■■□□□ 1.07
CACNA2D1P54289 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.76■■□□□ 1.07
CACNA2D1P54289 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.76■■□□□ 1.07
CACNA2D1P54289 AC092118.2-201ENST00000613495 667 ntBASIC21.76■■□□□ 1.07
CACNA2D1P54289 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.76■■□□□ 1.07
CACNA2D1P54289 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA2D1P54289 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
CACNA2D1P54289 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CACNA2D1P54289 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.75■■□□□ 1.07
CACNA2D1P54289 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D1P54289 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D1P54289 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D1P54289 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D1P54289 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CACNA2D1P54289 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.75■■□□□ 1.07
CACNA2D1P54289 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.75■■□□□ 1.07
CACNA2D1P54289 MIR4758-201ENST00000577688 71 ntBASIC21.75■■□□□ 1.07
CACNA2D1P54289 CYP2T3P-201ENST00000601990 817 ntBASIC21.75■■□□□ 1.07
CACNA2D1P54289 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.75■■□□□ 1.07
CACNA2D1P54289 AC133041.1-202ENST00000642053 222 ntBASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms