Protein–RNA interactions for Protein: P53899

CUZ1, CDC48-associated ubiquitin-like/zinc finger protein 1, yeastyeast

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUZ1P53899 AVT1YJR001W 1809 nt4.04□□□□□ -1.76
CUZ1P53899 SPT10YJL127C 1923 nt4.03□□□□□ -1.76
CUZ1P53899 NUP60YAR002W 1620 nt4.03□□□□□ -1.76
CUZ1P53899 DPH6YLR143W 2058 nt4.03□□□□□ -1.76
CUZ1P53899 RPS29BYDL061C 171 nt4.03□□□□□ -1.76
CUZ1P53899 RPS0AYGR214W 759 nt4.03□□□□□ -1.76
CUZ1P53899 SAE3YHR079C-A 276 nt4.03□□□□□ -1.76
CUZ1P53899 tT(UGU)Q1tT(UGU)Q1 76 nt4.03□□□□□ -1.76
CUZ1P53899 LSM1YJL124C 519 nt4.03□□□□□ -1.76
CUZ1P53899 EBS1YDR206W 2655 nt4.03□□□□□ -1.76
CUZ1P53899 SRB4YER022W 2064 nt4.02□□□□□ -1.77
CUZ1P53899 PEX5YDR244W 1839 nt4.02□□□□□ -1.77
CUZ1P53899 snR60snR60 104 nt4.02□□□□□ -1.77
CUZ1P53899 PSF1YDR013W 627 nt4.02□□□□□ -1.77
CUZ1P53899 INA22YIR024C 651 nt4.02□□□□□ -1.77
CUZ1P53899 YJL020W-AYJL020W-A 258 nt4.02□□□□□ -1.77
CUZ1P53899 PCC1YKR095W-A 267 nt4.02□□□□□ -1.77
CUZ1P53899 CCT7YJL111W 1653 nt4.02□□□□□ -1.77
CUZ1P53899 MNR2YKL064W 2910 nt4.02□□□□□ -1.77
CUZ1P53899 CYM1YDR430C 2970 nt4.02□□□□□ -1.77
CUZ1P53899 AKL1YBR059C 3327 nt4.01□□□□□ -1.77
CUZ1P53899 YDR545C-AYDR545C-A 480 nt4.01□□□□□ -1.77
CUZ1P53899 PAU23YLR037C 375 nt4.01□□□□□ -1.77
CUZ1P53899 RPL32YBL092W 393 nt4.01□□□□□ -1.77
CUZ1P53899 RPS27BYHR021C 249 nt4□□□□□ -1.77
CUZ1P53899 RRT15YLR162W-A 189 nt4□□□□□ -1.77
CUZ1P53899 YMR321CYMR321C 318 nt4□□□□□ -1.77
CUZ1P53899 YPL182CYPL182C 384 nt4□□□□□ -1.77
CUZ1P53899 snR46snR46 197 nt4□□□□□ -1.77
CUZ1P53899 AI5_ALPHAQ0070 1893 nt4□□□□□ -1.77
CUZ1P53899 ISW2YOR304W 3363 nt4□□□□□ -1.77
CUZ1P53899 KIN4YOR233W 2403 nt4□□□□□ -1.77
CUZ1P53899 OAF3YKR064W 2592 nt3.99□□□□□ -1.77
CUZ1P53899 YDR230WYDR230W 348 nt3.99□□□□□ -1.77
CUZ1P53899 YGL217CYGL217C 342 nt3.99□□□□□ -1.77
CUZ1P53899 YHL041WYHL041W 450 nt3.99□□□□□ -1.77
CUZ1P53899 FBP1YLR377C 1047 nt3.99□□□□□ -1.77
CUZ1P53899 YPL278CYPL278C 303 nt3.99□□□□□ -1.77
CUZ1P53899 CLF1YLR117C 2064 nt3.99□□□□□ -1.77
CUZ1P53899 ALY1YKR021W 2748 nt3.99□□□□□ -1.77
CUZ1P53899 ALG8YOR067C 1734 nt3.98□□□□□ -1.77
CUZ1P53899 ROK1YGL171W 1695 nt3.98□□□□□ -1.77
CUZ1P53899 SNU13YEL026W 381 nt3.98□□□□□ -1.77
CUZ1P53899 YPR063CYPR063C 423 nt3.98□□□□□ -1.77
CUZ1P53899 snR52snR52 92 nt3.98□□□□□ -1.77
CUZ1P53899 TPO2YGR138C 1845 nt3.98□□□□□ -1.77
CUZ1P53899 TPS2YDR074W 2691 nt3.98□□□□□ -1.77
CUZ1P53899 RDH54YBR073W 2877 nt3.97□□□□□ -1.77
CUZ1P53899 YHR182WYHR182W 2358 nt3.97□□□□□ -1.77
CUZ1P53899 ASK10YGR097W 3441 nt3.97□□□□□ -1.77
CUZ1P53899 FZO1YBR179C 2568 nt3.97□□□□□ -1.77
CUZ1P53899 HPA3YEL066W 540 nt3.97□□□□□ -1.77
CUZ1P53899 TIM13YGR181W 318 nt3.97□□□□□ -1.77
CUZ1P53899 ECM34YHL043W 513 nt3.97□□□□□ -1.77
CUZ1P53899 YNL028WYNL028W 318 nt3.97□□□□□ -1.77
CUZ1P53899 MSC7YHR039C 1935 nt3.97□□□□□ -1.77
CUZ1P53899 MNT3YIL014W 1893 nt3.96□□□□□ -1.77
CUZ1P53899 MNL1YHR204W 2391 nt3.96□□□□□ -1.78
CUZ1P53899 LYP1YNL268W 1836 nt3.96□□□□□ -1.78
CUZ1P53899 tK(CUU)CtK(CUU)C 73 nt3.96□□□□□ -1.78
CUZ1P53899 tK(CUU)D1tK(CUU)D1 73 nt3.96□□□□□ -1.78
CUZ1P53899 tK(CUU)D2tK(CUU)D2 73 nt3.96□□□□□ -1.78
CUZ1P53899 tK(CUU)E1tK(CUU)E1 73 nt3.96□□□□□ -1.78
CUZ1P53899 tK(CUU)E2tK(CUU)E2 73 nt3.96□□□□□ -1.78
CUZ1P53899 tK(CUU)FtK(CUU)F 73 nt3.96□□□□□ -1.78
CUZ1P53899 tK(CUU)G1tK(CUU)G1 73 nt3.96□□□□□ -1.78
CUZ1P53899 tK(CUU)G2tK(CUU)G2 73 nt3.96□□□□□ -1.78
CUZ1P53899 tK(CUU)G3tK(CUU)G3 73 nt3.96□□□□□ -1.78
CUZ1P53899 tK(CUU)ItK(CUU)I 73 nt3.96□□□□□ -1.78
CUZ1P53899 tK(CUU)JtK(CUU)J 73 nt3.96□□□□□ -1.78
CUZ1P53899 tK(CUU)KtK(CUU)K 73 nt3.96□□□□□ -1.78
CUZ1P53899 tK(CUU)MtK(CUU)M 73 nt3.96□□□□□ -1.78
CUZ1P53899 tK(CUU)PtK(CUU)P 73 nt3.96□□□□□ -1.78
CUZ1P53899 FMP32YFL046W 624 nt3.96□□□□□ -1.78
CUZ1P53899 YLR120W-AYLR120W-A 102 nt3.96□□□□□ -1.78
CUZ1P53899 HHT1YBR010W 411 nt3.96□□□□□ -1.78
CUZ1P53899 HBT1YDL223C 3141 nt3.95□□□□□ -1.78
CUZ1P53899 YNL097C-BYNL097C-B 123 nt3.95□□□□□ -1.78
CUZ1P53899 VIP1YLR410W 3441 nt3.95□□□□□ -1.78
CUZ1P53899 PEX8YGR077C 1770 nt3.94□□□□□ -1.78
CUZ1P53899 ALR2YFL050C 2577 nt3.94□□□□□ -1.78
CUZ1P53899 PRP42YDR235W 1635 nt3.94□□□□□ -1.78
CUZ1P53899 NNK1YKL171W 2787 nt3.94□□□□□ -1.78
CUZ1P53899 PRP43YGL120C 2304 nt3.94□□□□□ -1.78
CUZ1P53899 ARG5,6YER069W 2592 nt3.94□□□□□ -1.78
CUZ1P53899 PHM7YOL084W 2976 nt3.93□□□□□ -1.78
CUZ1P53899 CWH41YGL027C 2502 nt3.93□□□□□ -1.78
CUZ1P53899 UBP5YER144C 2418 nt3.93□□□□□ -1.78
CUZ1P53899 YER077CYER077C 2067 nt3.93□□□□□ -1.78
CUZ1P53899 snR7-SsnR7-S 179 nt3.93□□□□□ -1.78
CUZ1P53899 YFR035CYFR035C 345 nt3.93□□□□□ -1.78
CUZ1P53899 PAU13YHL046C 363 nt3.93□□□□□ -1.78
CUZ1P53899 RPL36AYMR194W 303 nt3.93□□□□□ -1.78
CUZ1P53899 YOR161W-BYOR161W-B 261 nt3.93□□□□□ -1.78
CUZ1P53899 RSC3YDR303C 2658 nt3.93□□□□□ -1.78
CUZ1P53899 NAM2YLR382C 2685 nt3.93□□□□□ -1.78
CUZ1P53899 VPS64YDR200C 1815 nt3.93□□□□□ -1.78
CUZ1P53899 BLM10YFL007W 6432 nt3.92□□□□□ -1.78
CUZ1P53899 MSS11YMR164C 2277 nt3.92□□□□□ -1.78
CUZ1P53899 NUP2YLR335W 2163 nt3.92□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 39.3 ms