Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 SIP18YMR175W 240 nt3.94□□□□□ -1.78
NRD1P53617 PMT4YJR143C 2289 nt3.94□□□□□ -1.78
NRD1P53617 YPK9YOR291W 4419 nt3.94□□□□□ -1.78
NRD1P53617 LOS1YKL205W 3303 nt3.94□□□□□ -1.78
NRD1P53617 YND1YER005W 1893 nt3.94□□□□□ -1.78
NRD1P53617 ECM32YER176W 3366 nt3.94□□□□□ -1.78 RIP-Chip
NRD1P53617 THI7YLR237W 1797 nt3.94□□□□□ -1.78
NRD1P53617 TGL4YKR089C 2733 nt3.93□□□□□ -1.78
NRD1P53617 YBR225WYBR225W 2703 nt3.93□□□□□ -1.78
NRD1P53617 YKL162C-AYKL162C-A 153 nt3.93□□□□□ -1.78
NRD1P53617 PCC1YKR095W-A 267 nt3.93□□□□□ -1.78
NRD1P53617 LYS2YBR115C 4179 nt3.93□□□□□ -1.78
NRD1P53617 SRB4YER022W 2064 nt3.93□□□□□ -1.78
NRD1P53617 BBC1YJL020C 3474 nt3.93□□□□□ -1.78
NRD1P53617 RIM20YOR275C 1986 nt3.93□□□□□ -1.78 RIP-Chip
NRD1P53617 ARO80YDR421W 2853 nt3.92□□□□□ -1.78
NRD1P53617 AIM21YIR003W 2040 nt3.92□□□□□ -1.78
NRD1P53617 SPI1YER150W 447 nt3.92□□□□□ -1.78 RIP-Chip
NRD1P53617 AVT1YJR001W 1809 nt3.92□□□□□ -1.78
NRD1P53617 USA1YML029W 2517 nt3.92□□□□□ -1.78
NRD1P53617 TOF2YKR010C 2316 nt3.92□□□□□ -1.78
NRD1P53617 UTP13YLR222C 2454 nt3.92□□□□□ -1.78
NRD1P53617 snR60snR60 104 nt3.91□□□□□ -1.78
NRD1P53617 YOS1YER074W-A 258 nt3.91□□□□□ -1.78
NRD1P53617 EPT1YHR123W 1176 nt3.91□□□□□ -1.78
NRD1P53617 MRP8YKL142W 660 nt3.91□□□□□ -1.78
NRD1P53617 EMP70YLR083C 2004 nt3.91□□□□□ -1.78
NRD1P53617 YSH1YLR277C 2340 nt3.91□□□□□ -1.78
NRD1P53617 SLM6YBR266C 453 nt3.91□□□□□ -1.78
NRD1P53617 DHR2YKL078W 2208 nt3.9□□□□□ -1.78
NRD1P53617 ADK1YDR226W 669 nt3.9□□□□□ -1.79
NRD1P53617 YGL041C-BYGL041C-B 183 nt3.9□□□□□ -1.79
NRD1P53617 YMR321CYMR321C 318 nt3.9□□□□□ -1.79 RIP-Chip
NRD1P53617 HHF2YNL030W 312 nt3.9□□□□□ -1.79
NRD1P53617 RPL33BYOR234C 324 nt3.9□□□□□ -1.79 RIP-Chip
NRD1P53617 ATP15YPL271W 189 nt3.9□□□□□ -1.79
NRD1P53617 YCK2YNL154C 1641 nt3.9□□□□□ -1.79
NRD1P53617 UTP15YMR093W 1542 nt3.9□□□□□ -1.79
NRD1P53617 ECM22YLR228C 2445 nt3.9□□□□□ -1.79
NRD1P53617 MTC4YBR255W 2085 nt3.9□□□□□ -1.79
NRD1P53617 YKL100CYKL100C 1764 nt3.89□□□□□ -1.79 RIP-Chip
NRD1P53617 YDR061WYDR061W 1620 nt3.89□□□□□ -1.79
NRD1P53617 DSF2YBR007C 2211 nt3.89□□□□□ -1.79
NRD1P53617 ATP17YDR377W 306 nt3.89□□□□□ -1.79
NRD1P53617 YER066C-AYER066C-A 501 nt3.89□□□□□ -1.79
NRD1P53617 YHR212CYHR212C 336 nt3.89□□□□□ -1.79
NRD1P53617 YIR040CYIR040C 333 nt3.89□□□□□ -1.79
NRD1P53617 YAR060CYAR060C 336 nt3.89□□□□□ -1.79
NRD1P53617 HTB2YBL002W 396 nt3.89□□□□□ -1.79
NRD1P53617 YOR034C-AYOR034C-A 243 nt3.89□□□□□ -1.79
NRD1P53617 EAP1YKL204W 1899 nt3.89□□□□□ -1.79
NRD1P53617 MIS1YBR084W 2928 nt3.89□□□□□ -1.79
NRD1P53617 SSE1YPL106C 2082 nt3.88□□□□□ -1.79
NRD1P53617 MNT3YIL014W 1893 nt3.88□□□□□ -1.79
NRD1P53617 EMI1YDR512C 564 nt3.88□□□□□ -1.79
NRD1P53617 RRT15YLR162W-A 189 nt3.88□□□□□ -1.79
NRD1P53617 HOP1YIL072W 1818 nt3.88□□□□□ -1.79
NRD1P53617 UBP5YER144C 2418 nt3.87□□□□□ -1.79
NRD1P53617 VMA1YDL185W 3216 nt3.87□□□□□ -1.79
NRD1P53617 SKM1YOL113W 1968 nt3.87□□□□□ -1.79 RIP-Chip
NRD1P53617 VID28YIL017C 2766 nt3.87□□□□□ -1.79
NRD1P53617 APC9YLR102C 798 nt3.87□□□□□ -1.79
NRD1P53617 YOR072W-AYOR072W-A 249 nt3.87□□□□□ -1.79
NRD1P53617 SRO7YPR032W 3102 nt3.86□□□□□ -1.79
NRD1P53617 RPB2YOR151C 3675 nt3.86□□□□□ -1.79
NRD1P53617 RPL6AYML073C 531 nt3.86□□□□□ -1.79
NRD1P53617 LSM2YBL026W 288 nt3.86□□□□□ -1.79 RIP-Chip
NRD1P53617 OPY2YPR075C 1083 nt3.86□□□□□ -1.79
NRD1P53617 YPR136CYPR136C 513 nt3.86□□□□□ -1.79
NRD1P53617 YBR099CYBR099C 384 nt3.86□□□□□ -1.79
NRD1P53617 YVC1YOR087W 2028 nt3.86□□□□□ -1.79
NRD1P53617 SCY1YGL083W 2415 nt3.86□□□□□ -1.79 RIP-Chip
NRD1P53617 HOS3YPL116W 2094 nt3.86□□□□□ -1.79
NRD1P53617 SLK19YOR195W 2466 nt3.85□□□□□ -1.79
NRD1P53617 STB2YMR053C 2553 nt3.85□□□□□ -1.79
NRD1P53617 YNL193WYNL193W 1677 nt3.85□□□□□ -1.79 RIP-Chip
NRD1P53617 YCR045W-AYCR045W-A 351 nt3.85□□□□□ -1.79
NRD1P53617 FMP32YFL046W 624 nt3.85□□□□□ -1.79
NRD1P53617 CDC26YFR036W 375 nt3.85□□□□□ -1.79 RIP-Chip
NRD1P53617 YOR333CYOR333C 417 nt3.85□□□□□ -1.79
NRD1P53617 YOR376WYOR376W 369 nt3.85□□□□□ -1.79
NRD1P53617 YBR131C-AYBR131C-A 90 nt3.85□□□□□ -1.79
NRD1P53617 AIP1YMR092C 1848 nt3.85□□□□□ -1.79
NRD1P53617 SWA2YDR320C 2007 nt3.85□□□□□ -1.79
NRD1P53617 IKS1YJL057C 2004 nt3.85□□□□□ -1.79
NRD1P53617 HUL4YJR036C 2679 nt3.85□□□□□ -1.79
NRD1P53617 VPS45YGL095C 1734 nt3.84□□□□□ -1.79
NRD1P53617 MCM7YBR202W 2538 nt3.84□□□□□ -1.79
NRD1P53617 SNX41YDR425W 1878 nt3.84□□□□□ -1.79
NRD1P53617 RPS29BYDL061C 171 nt3.84□□□□□ -1.79 RIP-Chip
NRD1P53617 HTA1YDR225W 399 nt3.84□□□□□ -1.79
NRD1P53617 ULI1YFR026C 510 nt3.84□□□□□ -1.79
NRD1P53617 MVB12YGR206W 306 nt3.84□□□□□ -1.79 RIP-Chip
NRD1P53617 RPL14BYHL001W 417 nt3.84□□□□□ -1.79
NRD1P53617 BAT1YHR208W 1182 nt3.84□□□□□ -1.79
NRD1P53617 YAE1YJR067C 426 nt3.84□□□□□ -1.79 RIP-Chip
NRD1P53617 RPL36AYMR194W 303 nt3.84□□□□□ -1.79
NRD1P53617 YBR201C-AYBR201C-A 204 nt3.84□□□□□ -1.79
NRD1P53617 KIN82YCR091W 2163 nt3.84□□□□□ -1.79
NRD1P53617 MNL1YHR204W 2391 nt3.84□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 19.8 ms