Protein–RNA interactions for Protein: P39940

RSP5, E3 ubiquitin-protein ligase RSP5, yeastyeast

Known RBP Predictions only

Length 809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSP5P39940 CDC45YLR103C 1953 nt3.49□□□□□ -1.85
RSP5P39940 LEU3YLR451W 2661 nt3.48□□□□□ -1.85
RSP5P39940 MSR1YHR091C 1932 nt3.48□□□□□ -1.85
RSP5P39940 MTR4YJL050W 3222 nt3.48□□□□□ -1.85
RSP5P39940 YGR025WYGR025W 303 nt3.48□□□□□ -1.85
RSP5P39940 NOP19YGR251W 591 nt3.48□□□□□ -1.85
RSP5P39940 RPS21BYJL136C 264 nt3.48□□□□□ -1.85
RSP5P39940 MRP8YKL142W 660 nt3.48□□□□□ -1.85
RSP5P39940 AI2Q0055 2565 nt3.48□□□□□ -1.85
RSP5P39940 GNT1YOR320C 1476 nt3.47□□□□□ -1.85
RSP5P39940 YSW1YBR148W 1830 nt3.47□□□□□ -1.85
RSP5P39940 YDR366CYDR366C 399 nt3.47□□□□□ -1.85
RSP5P39940 RPS24BYIL069C 408 nt3.47□□□□□ -1.85
RSP5P39940 YPR039WYPR039W 336 nt3.47□□□□□ -1.85
RSP5P39940 SPB1YCL054W 2526 nt3.47□□□□□ -1.85
RSP5P39940 YOL057WYOL057W 2136 nt3.47□□□□□ -1.85
RSP5P39940 SEA4YBL104C 3117 nt3.46□□□□□ -1.85
RSP5P39940 APC2YLR127C 2562 nt3.46□□□□□ -1.86
RSP5P39940 RPA135YPR010C 3612 nt3.46□□□□□ -1.86
RSP5P39940 PSK1YAL017W 4071 nt3.46□□□□□ -1.86
RSP5P39940 TFC1YBR123C 1950 nt3.46□□□□□ -1.86
RSP5P39940 Q0032Q0032 291 nt3.46□□□□□ -1.86
RSP5P39940 RPS20YHL015W 366 nt3.46□□□□□ -1.86
RSP5P39940 YIR040CYIR040C 333 nt3.46□□□□□ -1.86
RSP5P39940 JIP3YLR331C 378 nt3.46□□□□□ -1.86
RSP5P39940 RPS7BYNL096C 573 nt3.46□□□□□ -1.86
RSP5P39940 ESF2YNR054C 951 nt3.46□□□□□ -1.86
RSP5P39940 YAK1YJL141C 2424 nt3.46□□□□□ -1.86
RSP5P39940 RLF2YPR018W 1821 nt3.46□□□□□ -1.86
RSP5P39940 SWI1YPL016W 3945 nt3.46□□□□□ -1.86
RSP5P39940 NDD1YOR372C 1665 nt3.46□□□□□ -1.86
RSP5P39940 YNL034WYNL034W 1839 nt3.45□□□□□ -1.86
RSP5P39940 SSY1YDR160W 2559 nt3.45□□□□□ -1.86
RSP5P39940 YDR464C-AYDR464C-A 189 nt3.45□□□□□ -1.86
RSP5P39940 RPC10YHR143W-A 213 nt3.45□□□□□ -1.86
RSP5P39940 ECM5YMR176W 4236 nt3.44□□□□□ -1.86
RSP5P39940 DIE2YGR227W 1578 nt3.44□□□□□ -1.86
RSP5P39940 HPA3YEL066W 540 nt3.44□□□□□ -1.86
RSP5P39940 YER188C-AYER188C-A 300 nt3.44□□□□□ -1.86
RSP5P39940 TWF1YGR080W 999 nt3.44□□□□□ -1.86
RSP5P39940 RTT102YGR275W 474 nt3.44□□□□□ -1.86
RSP5P39940 FYV4YHR059W 393 nt3.44□□□□□ -1.86
RSP5P39940 YIL058WYIL058W 285 nt3.44□□□□□ -1.86
RSP5P39940 YAL063C-AYAL063C-A 291 nt3.44□□□□□ -1.86
RSP5P39940 YLR434CYLR434C 384 nt3.44□□□□□ -1.86
RSP5P39940 RPL19BYBL027W 570 nt3.44□□□□□ -1.86
RSP5P39940 ALA1YOR335C 2877 nt3.44□□□□□ -1.86
RSP5P39940 TAF1YGR274C 3201 nt3.44□□□□□ -1.86
RSP5P39940 SNT1YCR033W 3681 nt3.43□□□□□ -1.86
RSP5P39940 ATG21YPL100W 1491 nt3.43□□□□□ -1.86
RSP5P39940 TRM2YKR056W 1920 nt3.43□□□□□ -1.86
RSP5P39940 RPS1AYLR441C 768 nt3.43□□□□□ -1.86
RSP5P39940 YMR316C-AYMR316C-A 312 nt3.43□□□□□ -1.86
RSP5P39940 MRPL50YNR022C 420 nt3.43□□□□□ -1.86
RSP5P39940 SPA2YLL021W 4401 nt3.43□□□□□ -1.86
RSP5P39940 SMC3YJL074C 3693 nt3.43□□□□□ -1.86
RSP5P39940 YAT2YER024W 2772 nt3.42□□□□□ -1.86
RSP5P39940 BNA4YBL098W 1383 nt3.42□□□□□ -1.86
RSP5P39940 MKT1YNL085W 2493 nt3.42□□□□□ -1.86
RSP5P39940 tV(CAC)DtV(CAC)D 73 nt3.42□□□□□ -1.86
RSP5P39940 tV(CAC)HtV(CAC)H 73 nt3.42□□□□□ -1.86
RSP5P39940 UNG1YML021C 1080 nt3.42□□□□□ -1.86
RSP5P39940 RPS8AYBL072C 603 nt3.42□□□□□ -1.86
RSP5P39940 YOR225WYOR225W 330 nt3.42□□□□□ -1.86
RSP5P39940 IKI3YLR384C 4050 nt3.42□□□□□ -1.86
RSP5P39940 DNM1YLL001W 2274 nt3.41□□□□□ -1.86
RSP5P39940 DUF1YOL087C 3351 nt3.41□□□□□ -1.86
RSP5P39940 CAJ1YER048C 1176 nt3.41□□□□□ -1.86
RSP5P39940 YER076W-AYER076W-A 348 nt3.41□□□□□ -1.86
RSP5P39940 YER189WYER189W 369 nt3.41□□□□□ -1.86
RSP5P39940 YLR154C-HYLR154C-H 132 nt3.41□□□□□ -1.86
RSP5P39940 YLR156C-AYLR156C-A 132 nt3.41□□□□□ -1.86
RSP5P39940 YLR157C-CYLR157C-C 132 nt3.41□□□□□ -1.86
RSP5P39940 YLR159C-AYLR159C-A 132 nt3.41□□□□□ -1.86
RSP5P39940 AIM32YML050W 936 nt3.41□□□□□ -1.86
RSP5P39940 IMP4YNL075W 873 nt3.41□□□□□ -1.86
RSP5P39940 NTO1YPR031W 2247 nt3.41□□□□□ -1.86
RSP5P39940 PEX1YKL197C 3132 nt3.41□□□□□ -1.86
RSP5P39940 SOK1YDR006C 2706 nt3.41□□□□□ -1.86
RSP5P39940 TSC11YER093C 4293 nt3.4□□□□□ -1.86
RSP5P39940 ADK1YDR226W 669 nt3.4□□□□□ -1.87
RSP5P39940 STE14YDR410C 720 nt3.4□□□□□ -1.87
RSP5P39940 VFA1YER128W 612 nt3.4□□□□□ -1.87
RSP5P39940 YGR035CYGR035C 351 nt3.4□□□□□ -1.87
RSP5P39940 SPT4YGR063C 309 nt3.4□□□□□ -1.87
RSP5P39940 BAT1YHR208W 1182 nt3.4□□□□□ -1.87
RSP5P39940 tT(UGU)Q1tT(UGU)Q1 76 nt3.4□□□□□ -1.87
RSP5P39940 PET191YJR034W 327 nt3.4□□□□□ -1.87
RSP5P39940 TIM8YJR135W-A 264 nt3.4□□□□□ -1.87
RSP5P39940 RPL8BYLL045C 771 nt3.4□□□□□ -1.87
RSP5P39940 ICY1YMR195W 384 nt3.4□□□□□ -1.87
RSP5P39940 SQS1YNL224C 2304 nt3.4□□□□□ -1.87
RSP5P39940 TIR2YOR010C 756 nt3.4□□□□□ -1.87
RSP5P39940 YPR108W-AYPR108W-A 213 nt3.4□□□□□ -1.87
RSP5P39940 SPT10YJL127C 1923 nt3.4□□□□□ -1.87
RSP5P39940 YIL166CYIL166C 1629 nt3.4□□□□□ -1.87
RSP5P39940 MET5YJR137C 4329 nt3.4□□□□□ -1.87
RSP5P39940 ECM25YJL201W 1800 nt3.4□□□□□ -1.87
RSP5P39940 DSE4YNR067C 3354 nt3.39□□□□□ -1.87
RSP5P39940 GCD10YNL062C 1437 nt3.39□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 23.4 ms