Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDNFP39905 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDNFP39905 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
GDNFP39905 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDNFP39905 AL512408.1-201ENST00000569378 2000 ntBASIC17.86■□□□□ 0.45
GDNFP39905 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDNFP39905 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDNFP39905 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
GDNFP39905 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.86■□□□□ 0.45
GDNFP39905 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.86■□□□□ 0.45
GDNFP39905 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
GDNFP39905 BX842568.3-201ENST00000418104 571 ntBASIC17.86■□□□□ 0.45
GDNFP39905 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.86■□□□□ 0.45
GDNFP39905 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.86■□□□□ 0.45
GDNFP39905 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.86■□□□□ 0.45
GDNFP39905 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDNFP39905 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDNFP39905 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDNFP39905 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.86■□□□□ 0.45
GDNFP39905 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GDNFP39905 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDNFP39905 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.86■□□□□ 0.45
GDNFP39905 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.86■□□□□ 0.45
GDNFP39905 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDNFP39905 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GDNFP39905 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.86■□□□□ 0.45
GDNFP39905 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GDNFP39905 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GDNFP39905 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GDNFP39905 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GDNFP39905 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GDNFP39905 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
GDNFP39905 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GDNFP39905 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.85■□□□□ 0.45
GDNFP39905 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.85■□□□□ 0.45
GDNFP39905 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GDNFP39905 AC010141.3-201ENST00000456659 717 ntBASIC17.85■□□□□ 0.45
GDNFP39905 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GDNFP39905 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
GDNFP39905 AC008764.7-201ENST00000593779 1081 ntBASIC17.85■□□□□ 0.45
GDNFP39905 AC121338.2-201ENST00000622535 1744 ntBASIC17.85■□□□□ 0.45
GDNFP39905 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
GDNFP39905 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GDNFP39905 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.84■□□□□ 0.45
GDNFP39905 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.84■□□□□ 0.45
GDNFP39905 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.84■□□□□ 0.45
GDNFP39905 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.84■□□□□ 0.45
GDNFP39905 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.84■□□□□ 0.45
GDNFP39905 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.84■□□□□ 0.45
GDNFP39905 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
GDNFP39905 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDNFP39905 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDNFP39905 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
GDNFP39905 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDNFP39905 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDNFP39905 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDNFP39905 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDNFP39905 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.84■□□□□ 0.45
GDNFP39905 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
GDNFP39905 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.84■□□□□ 0.45
GDNFP39905 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
GDNFP39905 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.84■□□□□ 0.45
GDNFP39905 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.84■□□□□ 0.45
GDNFP39905 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.84■□□□□ 0.45
GDNFP39905 AC233992.3-201ENST00000607491 485 ntBASIC17.84■□□□□ 0.45
GDNFP39905 AL031432.3-201ENST00000607698 485 ntBASIC17.84■□□□□ 0.45
GDNFP39905 AC068587.7-201ENST00000641602 218 ntBASIC17.84■□□□□ 0.45
GDNFP39905 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDNFP39905 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDNFP39905 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
GDNFP39905 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDNFP39905 AC099778.1-201ENST00000568593 1911 ntBASIC17.84■□□□□ 0.45
GDNFP39905 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDNFP39905 BX323043.1-201ENST00000641006 1765 ntBASIC17.84■□□□□ 0.45
GDNFP39905 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GDNFP39905 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
GDNFP39905 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
GDNFP39905 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.83■□□□□ 0.45
GDNFP39905 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GDNFP39905 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GDNFP39905 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GDNFP39905 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
GDNFP39905 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
GDNFP39905 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
GDNFP39905 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
GDNFP39905 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
GDNFP39905 AP001330.3-201ENST00000520123 633 ntBASIC17.83■□□□□ 0.44
GDNFP39905 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 AL139246.5-201ENST00000606645 996 ntBASIC17.83■□□□□ 0.44
GDNFP39905 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GDNFP39905 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms