Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 ILV5YLR355C 1188 nt3.31□□□□□ -1.88
TDP1P38319 RPL16BYNL069C 597 nt3.31□□□□□ -1.88
TDP1P38319 PIS1YPR113W 663 nt3.31□□□□□ -1.88
TDP1P38319 PHO81YGR233C 3537 nt3.31□□□□□ -1.88
TDP1P38319 UBP5YER144C 2418 nt3.31□□□□□ -1.88
TDP1P38319 RNR4YGR180C 1038 nt3.3□□□□□ -1.88
TDP1P38319 YLR031WYLR031W 561 nt3.3□□□□□ -1.88
TDP1P38319 CWC24YLR323C 780 nt3.3□□□□□ -1.88
TDP1P38319 RPL19BYBL027W 570 nt3.3□□□□□ -1.88
TDP1P38319 HHF2YNL030W 312 nt3.3□□□□□ -1.88
TDP1P38319 HHT2YNL031C 411 nt3.3□□□□□ -1.88
TDP1P38319 IMP4YNL075W 873 nt3.3□□□□□ -1.88
TDP1P38319 snR36snR36 182 nt3.3□□□□□ -1.88
TDP1P38319 STU2YLR045C 2667 nt3.29□□□□□ -1.88
TDP1P38319 FRE8YLR047C 2061 nt3.29□□□□□ -1.88
TDP1P38319 YGL042CYGL042C 306 nt3.29□□□□□ -1.88
TDP1P38319 USE1YGL098W 738 nt3.29□□□□□ -1.88
TDP1P38319 YOR146WYOR146W 306 nt3.29□□□□□ -1.88
TDP1P38319 PCK1YKR097W 1650 nt3.29□□□□□ -1.88
TDP1P38319 GCN1YGL195W 8019 nt3.29□□□□□ -1.88
TDP1P38319 ETP1YHL010C 1758 nt3.28□□□□□ -1.88
TDP1P38319 RSF2YJR127C 4143 nt3.28□□□□□ -1.88
TDP1P38319 UTP13YLR222C 2454 nt3.28□□□□□ -1.88
TDP1P38319 MKT1YNL085W 2493 nt3.28□□□□□ -1.88
TDP1P38319 VEL1YGL258W 621 nt3.28□□□□□ -1.88
TDP1P38319 PFY1YOR122C 381 nt3.28□□□□□ -1.88
TDP1P38319 FKH2YNL068C 2589 nt3.27□□□□□ -1.89
TDP1P38319 RPS23AYGR118W 438 nt3.27□□□□□ -1.89
TDP1P38319 BLI1YKL061W 342 nt3.27□□□□□ -1.89
TDP1P38319 SHE2YKL130C 741 nt3.27□□□□□ -1.89
TDP1P38319 YBL108WYBL108W 306 nt3.27□□□□□ -1.89
TDP1P38319 BIL1YOR304C-A 231 nt3.27□□□□□ -1.89
TDP1P38319 RPS23BYPR132W 438 nt3.27□□□□□ -1.89
TDP1P38319 HOP1YIL072W 1818 nt3.27□□□□□ -1.89
TDP1P38319 YGR027W-BYGR027W-B 5268 nt3.26□□□□□ -1.89
TDP1P38319 YLR227W-BYLR227W-B 5268 nt3.26□□□□□ -1.89
TDP1P38319 YPR158C-DYPR158C-D 5268 nt3.26□□□□□ -1.89
TDP1P38319 YGR242WYGR242W 309 nt3.26□□□□□ -1.89
TDP1P38319 YJL197C-AYJL197C-A 282 nt3.26□□□□□ -1.89
TDP1P38319 YNL198CYNL198C 303 nt3.26□□□□□ -1.89
TDP1P38319 YDR338CYDR338C 2088 nt3.26□□□□□ -1.89
TDP1P38319 YCK2YNL154C 1641 nt3.26□□□□□ -1.89
TDP1P38319 YCG1YDR325W 3108 nt3.26□□□□□ -1.89
TDP1P38319 DIE2YGR227W 1578 nt3.25□□□□□ -1.89
TDP1P38319 CDC26YFR036W 375 nt3.25□□□□□ -1.89
TDP1P38319 RPB9YGL070C 369 nt3.25□□□□□ -1.89
TDP1P38319 DLS1YJL065C 504 nt3.25□□□□□ -1.89
TDP1P38319 LSM8YJR022W 330 nt3.25□□□□□ -1.89
TDP1P38319 RPS28BYLR264W 204 nt3.25□□□□□ -1.89
TDP1P38319 JIP3YLR331C 378 nt3.25□□□□□ -1.89
TDP1P38319 ISF1YMR081C 1017 nt3.25□□□□□ -1.89
TDP1P38319 URA10YMR271C 684 nt3.25□□□□□ -1.89
TDP1P38319 RFC3YNL290W 1023 nt3.25□□□□□ -1.89
TDP1P38319 YOR385WYOR385W 873 nt3.25□□□□□ -1.89
TDP1P38319 YPL152W-AYPL152W-A 99 nt3.25□□□□□ -1.89
TDP1P38319 SET1YHR119W 3243 nt3.25□□□□□ -1.89
TDP1P38319 GYL1YMR192W 2163 nt3.25□□□□□ -1.89
TDP1P38319 NIC96YFR002W 2520 nt3.25□□□□□ -1.89
TDP1P38319 MED1YPR070W 1701 nt3.24□□□□□ -1.89
TDP1P38319 RPN1YHR027C 2982 nt3.24□□□□□ -1.89
TDP1P38319 RSC1YGR056W 2787 nt3.24□□□□□ -1.89
TDP1P38319 SRC1YML034W 2505 nt3.24□□□□□ -1.89
TDP1P38319 YDR442WYDR442W 393 nt3.24□□□□□ -1.89
TDP1P38319 RPL30YGL030W 318 nt3.24□□□□□ -1.89
TDP1P38319 snR13snR13 124 nt3.24□□□□□ -1.89
TDP1P38319 REG1YDR028C 3045 nt3.24□□□□□ -1.89
TDP1P38319 CBP2YHL038C 1893 nt3.24□□□□□ -1.89
TDP1P38319 NDT80YHR124W 1884 nt3.24□□□□□ -1.89
TDP1P38319 JEN1YKL217W 1851 nt3.24□□□□□ -1.89
TDP1P38319 RAD5YLR032W 3510 nt3.23□□□□□ -1.89
TDP1P38319 ENA2YDR039C 3276 nt3.23□□□□□ -1.89
TDP1P38319 ENA1YDR040C 3276 nt3.23□□□□□ -1.89
TDP1P38319 21S_rRNA21S_rRNA 3296 nt3.23□□□□□ -1.89
TDP1P38319 RMT2YDR465C 1239 nt3.23□□□□□ -1.89
TDP1P38319 MSH4YFL003C 2637 nt3.23□□□□□ -1.89
TDP1P38319 YJL015CYJL015C 285 nt3.23□□□□□ -1.89
TDP1P38319 YKL033W-AYKL033W-A 711 nt3.23□□□□□ -1.89
TDP1P38319 SIP18YMR175W 240 nt3.23□□□□□ -1.89
TDP1P38319 YPL142CYPL142C 318 nt3.23□□□□□ -1.89
TDP1P38319 NTC20YBR188C 423 nt3.23□□□□□ -1.89
TDP1P38319 CHS3YBR023C 3498 nt3.23□□□□□ -1.89
TDP1P38319 HFM1YGL251C 3564 nt3.23□□□□□ -1.89
TDP1P38319 CWH41YGL027C 2502 nt3.23□□□□□ -1.89
TDP1P38319 MSH2YOL090W 2895 nt3.22□□□□□ -1.89
TDP1P38319 POL2YNL262W 6669 nt3.22□□□□□ -1.89
TDP1P38319 CEP3YMR168C 1827 nt3.22□□□□□ -1.89
TDP1P38319 CIN8YEL061C 3003 nt3.22□□□□□ -1.89
TDP1P38319 GPI8YDR331W 1236 nt3.22□□□□□ -1.89
TDP1P38319 YGL063C-AYGL063C-A 150 nt3.22□□□□□ -1.89
TDP1P38319 YGR265WYGR265W 411 nt3.22□□□□□ -1.89
TDP1P38319 YHR139C-AYHR139C-A 312 nt3.22□□□□□ -1.89
TDP1P38319 RPL22AYLR061W 366 nt3.22□□□□□ -1.89
TDP1P38319 YLR230WYLR230W 306 nt3.22□□□□□ -1.89
TDP1P38319 YOL019W-AYOL019W-A 153 nt3.22□□□□□ -1.89
TDP1P38319 SIZ1YDR409W 2715 nt3.22□□□□□ -1.89
TDP1P38319 RCY1YJL204C 2523 nt3.22□□□□□ -1.89
TDP1P38319 ICR1ICR1 3199 nt3.21□□□□□ -1.9
TDP1P38319 MAL33YBR297W 1407 nt3.21□□□□□ -1.9
TDP1P38319 DOA4YDR069C 2781 nt3.21□□□□□ -1.9
TDP1P38319 YDR183C-AYDR183C-A 258 nt3.21□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 32.5 ms