Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP24386 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP24386 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CHMP24386 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP24386 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMP24386 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP24386 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP24386 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMP24386 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.18■□□□□ 0.66
CHMP24386 AC006015.1-201ENST00000429970 570 ntBASIC19.18■□□□□ 0.66
CHMP24386 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP24386 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.18■□□□□ 0.66
CHMP24386 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.18■□□□□ 0.66
CHMP24386 EEF1DP3-203ENST00000566025 782 ntBASIC19.18■□□□□ 0.66
CHMP24386 AC138907.5-202ENST00000569484 235 ntBASIC19.18■□□□□ 0.66
CHMP24386 AC092437.1-201ENST00000624794 1048 ntBASIC19.18■□□□□ 0.66
CHMP24386 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CHMP24386 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CHMP24386 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP24386 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP24386 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP24386 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHMP24386 PLK5-205ENST00000642079 1969 ntBASIC19.17■□□□□ 0.66
CHMP24386 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.17■□□□□ 0.66
CHMP24386 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP24386 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP24386 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP24386 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP24386 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP24386 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP24386 KRT18P11-201ENST00000435214 1283 ntBASIC19.17■□□□□ 0.66
CHMP24386 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP24386 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP24386 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.17■□□□□ 0.66
CHMP24386 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP24386 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP24386 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP24386 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP24386 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP24386 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CHMP24386 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP24386 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CHMP24386 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP24386 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CHMP24386 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP24386 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CHMP24386 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP24386 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP24386 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CHMP24386 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP24386 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP24386 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP24386 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP24386 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMP24386 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.16■□□□□ 0.66
CHMP24386 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHMP24386 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.16■□□□□ 0.66
CHMP24386 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMP24386 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP24386 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMP24386 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP24386 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CHMP24386 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP24386 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP24386 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP24386 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMP24386 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP24386 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP24386 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CHMP24386 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP24386 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP24386 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP24386 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.15■□□□□ 0.66
CHMP24386 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP24386 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP24386 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMP24386 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP24386 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMP24386 AP001160.3-201ENST00000601484 763 ntBASIC19.15■□□□□ 0.66
CHMP24386 RARRES2P11-201ENST00000635158 484 ntBASIC19.15■□□□□ 0.66
CHMP24386 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP24386 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP24386 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP24386 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP24386 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHMP24386 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CHMP24386 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CHMP24386 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP24386 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP24386 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP24386 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP24386 AC004911.1-201ENST00000416316 871 ntBASIC19.14■□□□□ 0.65
CHMP24386 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP24386 AC010141.2-201ENST00000452426 721 ntBASIC19.14■□□□□ 0.65
CHMP24386 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP24386 KRT18P20-201ENST00000548986 1279 ntBASIC19.14■□□□□ 0.65
CHMP24386 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.14■□□□□ 0.65
CHMP24386 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP24386 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CHMP24386 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms