Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
UBL4AP11441 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBL4AP11441 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBL4AP11441 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBL4AP11441 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
UBL4AP11441 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBL4AP11441 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.98■□□□□ 0.63
UBL4AP11441 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBL4AP11441 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.98■□□□□ 0.63
UBL4AP11441 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBL4AP11441 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBL4AP11441 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBL4AP11441 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBL4AP11441 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBL4AP11441 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBL4AP11441 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBL4AP11441 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBL4AP11441 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.97■□□□□ 0.63
UBL4AP11441 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBL4AP11441 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.97■□□□□ 0.63
UBL4AP11441 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
UBL4AP11441 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.97■□□□□ 0.63
UBL4AP11441 AL162430.1-201ENST00000480705 870 ntBASIC18.97■□□□□ 0.63
UBL4AP11441 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.97■□□□□ 0.63
UBL4AP11441 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.97■□□□□ 0.63
UBL4AP11441 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBL4AP11441 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBL4AP11441 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBL4AP11441 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
UBL4AP11441 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBL4AP11441 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBL4AP11441 PLK5-205ENST00000642079 1969 ntBASIC18.97■□□□□ 0.63
UBL4AP11441 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBL4AP11441 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBL4AP11441 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBL4AP11441 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBL4AP11441 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBL4AP11441 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
UBL4AP11441 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.96■□□□□ 0.63
UBL4AP11441 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.96■□□□□ 0.63
UBL4AP11441 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
UBL4AP11441 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.96■□□□□ 0.63
UBL4AP11441 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.96■□□□□ 0.63
UBL4AP11441 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBL4AP11441 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
UBL4AP11441 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
UBL4AP11441 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
UBL4AP11441 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.96■□□□□ 0.63
UBL4AP11441 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
UBL4AP11441 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBL4AP11441 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBL4AP11441 AC006128.1-201ENST00000624704 1661 ntBASIC18.95■□□□□ 0.62
UBL4AP11441 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBL4AP11441 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBL4AP11441 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
UBL4AP11441 RBM17P2-201ENST00000616397 1405 ntBASIC18.95■□□□□ 0.62
UBL4AP11441 MIR935-201ENST00000401179 91 ntBASIC18.95■□□□□ 0.62
UBL4AP11441 KRT18P11-201ENST00000435214 1283 ntBASIC18.95■□□□□ 0.62
UBL4AP11441 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBL4AP11441 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.95■□□□□ 0.62
UBL4AP11441 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.95■□□□□ 0.62
UBL4AP11441 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.95■□□□□ 0.62
UBL4AP11441 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.95■□□□□ 0.62
UBL4AP11441 AC243732.1-201ENST00000612648 864 ntBASIC18.95■□□□□ 0.62
UBL4AP11441 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBL4AP11441 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
UBL4AP11441 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
UBL4AP11441 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
UBL4AP11441 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
UBL4AP11441 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.95■□□□□ 0.62
UBL4AP11441 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.94■□□□□ 0.62
UBL4AP11441 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBL4AP11441 AC011484.1-201ENST00000377652 1995 ntBASIC18.94■□□□□ 0.62
UBL4AP11441 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.94■□□□□ 0.62
UBL4AP11441 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBL4AP11441 AC016769.1-201ENST00000409132 1010 ntBASIC18.94■□□□□ 0.62
UBL4AP11441 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.94■□□□□ 0.62
UBL4AP11441 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBL4AP11441 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBL4AP11441 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.94■□□□□ 0.62
UBL4AP11441 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBL4AP11441 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
UBL4AP11441 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
UBL4AP11441 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.94■□□□□ 0.62
UBL4AP11441 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UBL4AP11441 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.93■□□□□ 0.62
UBL4AP11441 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UBL4AP11441 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBL4AP11441 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
UBL4AP11441 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.93■□□□□ 0.62
UBL4AP11441 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.93■□□□□ 0.62
UBL4AP11441 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBL4AP11441 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.93■□□□□ 0.62
UBL4AP11441 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBL4AP11441 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UBL4AP11441 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.93■□□□□ 0.62
UBL4AP11441 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.93■□□□□ 0.62
UBL4AP11441 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
UBL4AP11441 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.93■□□□□ 0.62
UBL4AP11441 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms