Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB40ALP0C0E4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 AC060766.5-201ENST00000590539 871 ntBASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 HLA-B-256ENST00000639848 1089 ntBASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB40ALP0C0E4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40ALP0C0E4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB40ALP0C0E4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40ALP0C0E4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RAB40ALP0C0E4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40ALP0C0E4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40ALP0C0E4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40ALP0C0E4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.4■□□□□ 0.7
RAB40ALP0C0E4 AC006058.3-201ENST00000606217 1069 ntBASIC19.4■□□□□ 0.7
RAB40ALP0C0E4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40ALP0C0E4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40ALP0C0E4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40ALP0C0E4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40ALP0C0E4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40ALP0C0E4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40ALP0C0E4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
RAB40ALP0C0E4 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB40ALP0C0E4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB40ALP0C0E4 AC116050.2-201ENST00000612102 1779 ntBASIC19.39■□□□□ 0.7
RAB40ALP0C0E4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB40ALP0C0E4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB40ALP0C0E4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB40ALP0C0E4 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.39■□□□□ 0.7
RAB40ALP0C0E4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 AP003097.1-201ENST00000530657 1135 ntBASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB40ALP0C0E4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB40ALP0C0E4 CYP21A1P-202ENST00000354927 1481 ntBASIC19.38■□□□□ 0.69
RAB40ALP0C0E4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB40ALP0C0E4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB40ALP0C0E4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB40ALP0C0E4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.38■□□□□ 0.69
RAB40ALP0C0E4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RAB40ALP0C0E4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB40ALP0C0E4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.38■□□□□ 0.69
RAB40ALP0C0E4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RAB40ALP0C0E4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB40ALP0C0E4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.38■□□□□ 0.69
RAB40ALP0C0E4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 AC128676.1-201ENST00000454392 318 ntBASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB40ALP0C0E4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms