Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.25■□□□□ 0.83
RBP1P09455 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
RBP1P09455 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RBP1P09455 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RBP1P09455 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
RBP1P09455 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.25■□□□□ 0.83
RBP1P09455 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.25■□□□□ 0.83
RBP1P09455 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.25■□□□□ 0.83
RBP1P09455 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RBP1P09455 AL162377.1-201ENST00000618844 1793 ntBASIC20.25■□□□□ 0.83
RBP1P09455 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RBP1P09455 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.25■□□□□ 0.83
RBP1P09455 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RBP1P09455 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RBP1P09455 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
RBP1P09455 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RBP1P09455 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RBP1P09455 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.25■□□□□ 0.83
RBP1P09455 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RBP1P09455 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RBP1P09455 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RBP1P09455 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.24■□□□□ 0.83
RBP1P09455 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RBP1P09455 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.24■□□□□ 0.83
RBP1P09455 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RBP1P09455 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RBP1P09455 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RBP1P09455 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RBP1P09455 AC010141.2-201ENST00000452426 721 ntBASIC20.24■□□□□ 0.83
RBP1P09455 AC005837.3-201ENST00000612163 286 ntBASIC20.24■□□□□ 0.83
RBP1P09455 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RBP1P09455 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.24■□□□□ 0.83
RBP1P09455 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RBP1P09455 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
RBP1P09455 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RBP1P09455 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RBP1P09455 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RBP1P09455 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RBP1P09455 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RBP1P09455 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RBP1P09455 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RBP1P09455 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
RBP1P09455 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RBP1P09455 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RBP1P09455 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RBP1P09455 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RBP1P09455 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RBP1P09455 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RBP1P09455 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RBP1P09455 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.23■□□□□ 0.83
RBP1P09455 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RBP1P09455 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RBP1P09455 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RBP1P09455 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RBP1P09455 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RBP1P09455 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.23■□□□□ 0.83
RBP1P09455 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RBP1P09455 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.23■□□□□ 0.83
RBP1P09455 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RBP1P09455 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.22■□□□□ 0.83
RBP1P09455 LINC02228-203ENST00000641970 1355 ntBASIC20.22■□□□□ 0.83
RBP1P09455 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RBP1P09455 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RBP1P09455 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RBP1P09455 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.22■□□□□ 0.83
RBP1P09455 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.22■□□□□ 0.83
RBP1P09455 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RBP1P09455 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RBP1P09455 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RBP1P09455 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.22■□□□□ 0.83
RBP1P09455 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RBP1P09455 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RBP1P09455 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.22■□□□□ 0.83
RBP1P09455 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RBP1P09455 AC105265.2-201ENST00000467189 838 ntBASIC20.22■□□□□ 0.83
RBP1P09455 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RBP1P09455 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
RBP1P09455 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.22■□□□□ 0.83
RBP1P09455 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RBP1P09455 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RBP1P09455 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RBP1P09455 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RBP1P09455 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RBP1P09455 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RBP1P09455 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RBP1P09455 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RBP1P09455 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.21■□□□□ 0.83
RBP1P09455 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RBP1P09455 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RBP1P09455 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.21■□□□□ 0.83
RBP1P09455 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RBP1P09455 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RBP1P09455 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.21■□□□□ 0.83
RBP1P09455 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RBP1P09455 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RBP1P09455 AL512408.1-201ENST00000569378 2000 ntBASIC20.21■□□□□ 0.83
RBP1P09455 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.21■□□□□ 0.83
RBP1P09455 DUX4L2-201ENST00000561772 1275 ntBASIC20.21■□□□□ 0.83
RBP1P09455 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.21■□□□□ 0.83
RBP1P09455 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms