Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL4A2P08572 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL4A2P08572 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL4A2P08572 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
COL4A2P08572 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.95■□□□□ 0.94
COL4A2P08572 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL4A2P08572 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL4A2P08572 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.95■□□□□ 0.94
COL4A2P08572 C2orf69P4-201ENST00000565394 541 ntBASIC20.95■□□□□ 0.94
COL4A2P08572 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.95■□□□□ 0.94
COL4A2P08572 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.95■□□□□ 0.94
COL4A2P08572 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL4A2P08572 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL4A2P08572 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
COL4A2P08572 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COL4A2P08572 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.94■□□□□ 0.94
COL4A2P08572 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL4A2P08572 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.94■□□□□ 0.94
COL4A2P08572 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL4A2P08572 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL4A2P08572 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL4A2P08572 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.94■□□□□ 0.94
COL4A2P08572 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.94■□□□□ 0.94
COL4A2P08572 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL4A2P08572 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL4A2P08572 AC087499.1-201ENST00000418141 1075 ntBASIC20.94■□□□□ 0.94
COL4A2P08572 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL4A2P08572 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.94■□□□□ 0.94
COL4A2P08572 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
COL4A2P08572 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.94■□□□□ 0.94
COL4A2P08572 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.94■□□□□ 0.94
COL4A2P08572 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL4A2P08572 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL4A2P08572 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A2P08572 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
COL4A2P08572 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.93■□□□□ 0.94
COL4A2P08572 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.93■□□□□ 0.94
COL4A2P08572 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
COL4A2P08572 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.93■□□□□ 0.94
COL4A2P08572 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.93■□□□□ 0.94
COL4A2P08572 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.93■□□□□ 0.94
COL4A2P08572 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.93■□□□□ 0.94
COL4A2P08572 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A2P08572 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A2P08572 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A2P08572 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
COL4A2P08572 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A2P08572 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A2P08572 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL4A2P08572 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A2P08572 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A2P08572 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A2P08572 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A2P08572 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.92■□□□□ 0.94
COL4A2P08572 MIR1224-201ENST00000408193 85 ntBASIC20.92■□□□□ 0.94
COL4A2P08572 PGM5P4-201ENST00000421970 445 ntBASIC20.92■□□□□ 0.94
COL4A2P08572 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.92■□□□□ 0.94
COL4A2P08572 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.92■□□□□ 0.94
COL4A2P08572 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.92■□□□□ 0.94
COL4A2P08572 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.92■□□□□ 0.94
COL4A2P08572 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.92■□□□□ 0.94
COL4A2P08572 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.92■□□□□ 0.94
COL4A2P08572 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A2P08572 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A2P08572 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A2P08572 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A2P08572 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.92■□□□□ 0.94
COL4A2P08572 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A2P08572 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
COL4A2P08572 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A2P08572 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A2P08572 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A2P08572 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A2P08572 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.92■□□□□ 0.94
COL4A2P08572 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
COL4A2P08572 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A2P08572 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL4A2P08572 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.92■□□□□ 0.94
COL4A2P08572 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
COL4A2P08572 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.92■□□□□ 0.94
COL4A2P08572 RARRES2P10-201ENST00000564312 460 ntBASIC20.92■□□□□ 0.94
COL4A2P08572 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.92■□□□□ 0.94
COL4A2P08572 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
COL4A2P08572 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
COL4A2P08572 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A2P08572 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A2P08572 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A2P08572 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A2P08572 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.91■□□□□ 0.94
COL4A2P08572 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.91■□□□□ 0.94
COL4A2P08572 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.91■□□□□ 0.94
COL4A2P08572 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
COL4A2P08572 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.91■□□□□ 0.94
COL4A2P08572 AC110285.5-201ENST00000611501 352 ntBASIC20.91■□□□□ 0.94
COL4A2P08572 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A2P08572 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A2P08572 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A2P08572 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.91■□□□□ 0.94
COL4A2P08572 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL4A2P08572 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms