Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SRPRAP08240 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.84■□□□□ 0.93
SRPRAP08240 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SRPRAP08240 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SRPRAP08240 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.84■□□□□ 0.93
SRPRAP08240 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.84■□□□□ 0.93
SRPRAP08240 LINC00565-201ENST00000562710 2331 ntBASIC20.84■□□□□ 0.93
SRPRAP08240 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SRPRAP08240 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
SRPRAP08240 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SRPRAP08240 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.83■□□□□ 0.93
SRPRAP08240 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SRPRAP08240 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SRPRAP08240 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRPRAP08240 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.83■□□□□ 0.93
SRPRAP08240 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.83■□□□□ 0.93
SRPRAP08240 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRPRAP08240 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.83■□□□□ 0.93
SRPRAP08240 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRPRAP08240 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
SRPRAP08240 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.83■□□□□ 0.93
SRPRAP08240 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.83■□□□□ 0.93
SRPRAP08240 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.83■□□□□ 0.93
SRPRAP08240 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.83■□□□□ 0.93
SRPRAP08240 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.83■□□□□ 0.93
SRPRAP08240 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.83■□□□□ 0.93
SRPRAP08240 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SRPRAP08240 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SRPRAP08240 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SRPRAP08240 AC011484.1-201ENST00000377652 1995 ntBASIC20.83■□□□□ 0.92
SRPRAP08240 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRPRAP08240 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRPRAP08240 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.82■□□□□ 0.92
SRPRAP08240 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.82■□□□□ 0.92
SRPRAP08240 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRPRAP08240 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.82■□□□□ 0.92
SRPRAP08240 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRPRAP08240 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.82■□□□□ 0.92
SRPRAP08240 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SRPRAP08240 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
SRPRAP08240 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SRPRAP08240 AC060766.5-201ENST00000590539 871 ntBASIC20.82■□□□□ 0.92
SRPRAP08240 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.82■□□□□ 0.92
SRPRAP08240 HLA-B-256ENST00000639848 1089 ntBASIC20.82■□□□□ 0.92
SRPRAP08240 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRPRAP08240 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SRPRAP08240 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.81■□□□□ 0.92
SRPRAP08240 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SRPRAP08240 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SRPRAP08240 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRPRAP08240 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.81■□□□□ 0.92
SRPRAP08240 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRPRAP08240 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SRPRAP08240 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.81■□□□□ 0.92
SRPRAP08240 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.81■□□□□ 0.92
SRPRAP08240 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.81■□□□□ 0.92
SRPRAP08240 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.81■□□□□ 0.92
SRPRAP08240 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SRPRAP08240 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.81■□□□□ 0.92
SRPRAP08240 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.81■□□□□ 0.92
SRPRAP08240 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.81■□□□□ 0.92
SRPRAP08240 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRPRAP08240 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.81■□□□□ 0.92
SRPRAP08240 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRPRAP08240 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SRPRAP08240 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SRPRAP08240 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.8■□□□□ 0.92
SRPRAP08240 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPRAP08240 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPRAP08240 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPRAP08240 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPRAP08240 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.8■□□□□ 0.92
SRPRAP08240 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.8■□□□□ 0.92
SRPRAP08240 UNC93B5-201ENST00000530315 699 ntBASIC20.8■□□□□ 0.92
SRPRAP08240 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.8■□□□□ 0.92
SRPRAP08240 ITM2C-210ENST00000620962 501 ntBASIC20.8■□□□□ 0.92
SRPRAP08240 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPRAP08240 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPRAP08240 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SRPRAP08240 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.8■□□□□ 0.92
SRPRAP08240 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.8■□□□□ 0.92
SRPRAP08240 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPRAP08240 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SRPRAP08240 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPRAP08240 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPRAP08240 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.79■□□□□ 0.92
SRPRAP08240 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.79■□□□□ 0.92
SRPRAP08240 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SRPRAP08240 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRPRAP08240 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRPRAP08240 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.79■□□□□ 0.92
SRPRAP08240 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.79■□□□□ 0.92
SRPRAP08240 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.79■□□□□ 0.92
SRPRAP08240 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRPRAP08240 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
SRPRAP08240 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRPRAP08240 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRPRAP08240 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.79■□□□□ 0.92
SRPRAP08240 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRPRAP08240 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms