Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RETP07949 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RETP07949 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.79■□□□□ 0.92
RETP07949 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RETP07949 AC012618.2-201ENST00000428058 849 ntBASIC20.79■□□□□ 0.92
RETP07949 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.79■□□□□ 0.92
RETP07949 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RETP07949 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.79■□□□□ 0.92
RETP07949 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.79■□□□□ 0.92
RETP07949 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RETP07949 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RETP07949 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.79■□□□□ 0.92
RETP07949 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.79■□□□□ 0.92
RETP07949 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RETP07949 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RETP07949 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
RETP07949 AC092368.3-202ENST00000574180 1591 ntBASIC20.79■□□□□ 0.92
RETP07949 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RETP07949 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.79■□□□□ 0.92
RETP07949 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RETP07949 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RETP07949 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RETP07949 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RETP07949 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RETP07949 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
RETP07949 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
RETP07949 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RETP07949 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RETP07949 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.78■□□□□ 0.92
RETP07949 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.78■□□□□ 0.92
RETP07949 AC069544.1-201ENST00000609399 999 ntBASIC20.78■□□□□ 0.92
RETP07949 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.78■□□□□ 0.92
RETP07949 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RETP07949 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RETP07949 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.77■□□□□ 0.92
RETP07949 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RETP07949 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.77■□□□□ 0.92
RETP07949 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETP07949 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.77■□□□□ 0.92
RETP07949 AL589743.5-201ENST00000616611 1050 ntBASIC20.77■□□□□ 0.92
RETP07949 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RETP07949 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETP07949 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RETP07949 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
RETP07949 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RETP07949 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.77■□□□□ 0.91
RETP07949 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.76■□□□□ 0.91
RETP07949 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RETP07949 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RETP07949 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RETP07949 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RETP07949 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RETP07949 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RETP07949 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RETP07949 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RETP07949 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RETP07949 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.76■□□□□ 0.91
RETP07949 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.76■□□□□ 0.91
RETP07949 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.76■□□□□ 0.91
RETP07949 AC233263.1-201ENST00000578059 224 ntBASIC20.76■□□□□ 0.91
RETP07949 AC233702.5-201ENST00000584107 538 ntBASIC20.76■□□□□ 0.91
RETP07949 FAM21FP-204ENST00000608637 956 ntBASIC20.76■□□□□ 0.91
RETP07949 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RETP07949 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RETP07949 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RETP07949 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RETP07949 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RETP07949 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RETP07949 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RETP07949 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RETP07949 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RETP07949 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.75■□□□□ 0.91
RETP07949 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RETP07949 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RETP07949 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RETP07949 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
RETP07949 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RETP07949 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RETP07949 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.75■□□□□ 0.91
RETP07949 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.75■□□□□ 0.91
RETP07949 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.75■□□□□ 0.91
RETP07949 AC133561.5-201ENST00000635547 218 ntBASIC20.75■□□□□ 0.91
RETP07949 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.75■□□□□ 0.91
RETP07949 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RETP07949 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.74■□□□□ 0.91
RETP07949 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.74■□□□□ 0.91
RETP07949 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RETP07949 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RETP07949 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RETP07949 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RETP07949 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.74■□□□□ 0.91
RETP07949 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RETP07949 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.74■□□□□ 0.91
RETP07949 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RETP07949 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RETP07949 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RETP07949 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RETP07949 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.74■□□□□ 0.91
RETP07949 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.74■□□□□ 0.91
RETP07949 SOX15-203ENST00000570788 1093 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms