Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NGFP01138 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.82■□□□□ 0.44
NGFP01138 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.82■□□□□ 0.44
NGFP01138 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.82■□□□□ 0.44
NGFP01138 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
NGFP01138 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NGFP01138 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NGFP01138 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.82■□□□□ 0.44
NGFP01138 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.82■□□□□ 0.44
NGFP01138 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.82■□□□□ 0.44
NGFP01138 AC073111.5-205ENST00000641717 521 ntBASIC17.82■□□□□ 0.44
NGFP01138 AC006128.1-201ENST00000624704 1661 ntBASIC17.82■□□□□ 0.44
NGFP01138 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NGFP01138 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NGFP01138 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NGFP01138 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NGFP01138 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
NGFP01138 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NGFP01138 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NGFP01138 CDCA4P2-201ENST00000441182 718 ntBASIC17.81■□□□□ 0.44
NGFP01138 AL591742.1-201ENST00000604433 565 ntBASIC17.81■□□□□ 0.44
NGFP01138 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.81■□□□□ 0.44
NGFP01138 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.81■□□□□ 0.44
NGFP01138 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NGFP01138 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NGFP01138 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.81■□□□□ 0.44
NGFP01138 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NGFP01138 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NGFP01138 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NGFP01138 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NGFP01138 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NGFP01138 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NGFP01138 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NGFP01138 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.81■□□□□ 0.44
NGFP01138 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
NGFP01138 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.8■□□□□ 0.44
NGFP01138 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NGFP01138 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.8■□□□□ 0.44
NGFP01138 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NGFP01138 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
NGFP01138 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NGFP01138 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.8■□□□□ 0.44
NGFP01138 AC007322.1-201ENST00000426983 750 ntBASIC17.8■□□□□ 0.44
NGFP01138 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.8■□□□□ 0.44
NGFP01138 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
NGFP01138 AC007322.4-201ENST00000509611 723 ntBASIC17.8■□□□□ 0.44
NGFP01138 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.8■□□□□ 0.44
NGFP01138 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.8■□□□□ 0.44
NGFP01138 AC231657.2-201ENST00000624556 255 ntBASIC17.8■□□□□ 0.44
NGFP01138 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NGFP01138 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.8■□□□□ 0.44
NGFP01138 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NGFP01138 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NGFP01138 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.8■□□□□ 0.44
NGFP01138 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
NGFP01138 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
NGFP01138 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NGFP01138 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NGFP01138 AC068338.2-201ENST00000563278 1430 ntBASIC17.8■□□□□ 0.44
NGFP01138 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
NGFP01138 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NGFP01138 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NGFP01138 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NGFP01138 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NGFP01138 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NGFP01138 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.79■□□□□ 0.44
NGFP01138 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NGFP01138 AC007322.3-201ENST00000426526 701 ntBASIC17.79■□□□□ 0.44
NGFP01138 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.79■□□□□ 0.44
NGFP01138 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NGFP01138 AC016405.3-201ENST00000607710 860 ntBASIC17.79■□□□□ 0.44
NGFP01138 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.79■□□□□ 0.44
NGFP01138 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NGFP01138 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.79■□□□□ 0.44
NGFP01138 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NGFP01138 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NGFP01138 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
NGFP01138 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.79■□□□□ 0.44
NGFP01138 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NGFP01138 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
NGFP01138 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NGFP01138 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NGFP01138 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NGFP01138 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NGFP01138 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.79■□□□□ 0.44
NGFP01138 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.79■□□□□ 0.44
NGFP01138 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.79■□□□□ 0.44
NGFP01138 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NGFP01138 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NGFP01138 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NGFP01138 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.78■□□□□ 0.44
NGFP01138 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NGFP01138 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NGFP01138 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
NGFP01138 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
NGFP01138 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.78■□□□□ 0.44
NGFP01138 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NGFP01138 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NGFP01138 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.78■□□□□ 0.44
NGFP01138 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms