Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DHFRP00374 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
DHFRP00374 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DHFRP00374 AC079089.2-201ENST00000531211 1277 ntBASIC17.76■□□□□ 0.43
DHFRP00374 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DHFRP00374 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
DHFRP00374 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DHFRP00374 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
DHFRP00374 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DHFRP00374 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DHFRP00374 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
DHFRP00374 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DHFRP00374 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
DHFRP00374 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DHFRP00374 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DHFRP00374 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.76■□□□□ 0.43
DHFRP00374 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.76■□□□□ 0.43
DHFRP00374 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.75■□□□□ 0.43
DHFRP00374 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DHFRP00374 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DHFRP00374 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DHFRP00374 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
DHFRP00374 OR7E47P-201ENST00000546390 1422 ntBASIC17.75■□□□□ 0.43
DHFRP00374 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
DHFRP00374 AC099778.1-201ENST00000568593 1911 ntBASIC17.75■□□□□ 0.43
DHFRP00374 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
DHFRP00374 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DHFRP00374 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.75■□□□□ 0.43
DHFRP00374 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.75■□□□□ 0.43
DHFRP00374 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
DHFRP00374 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.75■□□□□ 0.43
DHFRP00374 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DHFRP00374 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.75■□□□□ 0.43
DHFRP00374 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.75■□□□□ 0.43
DHFRP00374 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.75■□□□□ 0.43
DHFRP00374 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DHFRP00374 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.75■□□□□ 0.43
DHFRP00374 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.75■□□□□ 0.43
DHFRP00374 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
DHFRP00374 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DHFRP00374 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DHFRP00374 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DHFRP00374 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DHFRP00374 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
DHFRP00374 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DHFRP00374 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
DHFRP00374 AC007225.1-201ENST00000566331 1836 ntBASIC17.75■□□□□ 0.43
DHFRP00374 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.74■□□□□ 0.43
DHFRP00374 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
DHFRP00374 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
DHFRP00374 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DHFRP00374 AL512408.1-201ENST00000569378 2000 ntBASIC17.74■□□□□ 0.43
DHFRP00374 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DHFRP00374 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DHFRP00374 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DHFRP00374 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DHFRP00374 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DHFRP00374 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
DHFRP00374 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
DHFRP00374 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DHFRP00374 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.74■□□□□ 0.43
DHFRP00374 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DHFRP00374 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
DHFRP00374 MTDHP2-201ENST00000601468 714 ntBASIC17.74■□□□□ 0.43
DHFRP00374 AC092028.1-203ENST00000608262 953 ntBASIC17.74■□□□□ 0.43
DHFRP00374 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.74■□□□□ 0.43
DHFRP00374 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.74■□□□□ 0.43
DHFRP00374 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DHFRP00374 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.74■□□□□ 0.43
DHFRP00374 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.74■□□□□ 0.43
DHFRP00374 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DHFRP00374 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.74■□□□□ 0.43
DHFRP00374 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
DHFRP00374 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DHFRP00374 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DHFRP00374 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.73■□□□□ 0.43
DHFRP00374 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DHFRP00374 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DHFRP00374 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DHFRP00374 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DHFRP00374 MIR4787-201ENST00000607364 84 ntBASIC17.73■□□□□ 0.43
DHFRP00374 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
DHFRP00374 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DHFRP00374 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
DHFRP00374 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
DHFRP00374 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DHFRP00374 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
DHFRP00374 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
DHFRP00374 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DHFRP00374 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.72■□□□□ 0.43
DHFRP00374 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.72■□□□□ 0.43
DHFRP00374 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
DHFRP00374 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.72■□□□□ 0.43
DHFRP00374 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DHFRP00374 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
DHFRP00374 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
DHFRP00374 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.72■□□□□ 0.43
DHFRP00374 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DHFRP00374 AC120498.9-201ENST00000339021 3867 ntBASIC17.72■□□□□ 0.43
DHFRP00374 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms