Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.37■□□□□ 0.53
CLDN1O95832 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN1O95832 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN1O95832 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.37■□□□□ 0.53
CLDN1O95832 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.37■□□□□ 0.53
CLDN1O95832 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.37■□□□□ 0.53
CLDN1O95832 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.37■□□□□ 0.53
CLDN1O95832 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.37■□□□□ 0.53
CLDN1O95832 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN1O95832 AL049637.2-201ENST00000641778 930 ntBASIC18.37■□□□□ 0.53
CLDN1O95832 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN1O95832 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN1O95832 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN1O95832 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN1O95832 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CLDN1O95832 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN1O95832 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN1O95832 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLDN1O95832 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN1O95832 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN1O95832 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.36■□□□□ 0.53
CLDN1O95832 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN1O95832 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN1O95832 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN1O95832 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDN1O95832 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.36■□□□□ 0.53
CLDN1O95832 TMPOP1-202ENST00000424642 1267 ntBASIC18.36■□□□□ 0.53
CLDN1O95832 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CLDN1O95832 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDN1O95832 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN1O95832 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN1O95832 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDN1O95832 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.36■□□□□ 0.53
CLDN1O95832 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.36■□□□□ 0.53
CLDN1O95832 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN1O95832 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.36■□□□□ 0.53
CLDN1O95832 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN1O95832 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.36■□□□□ 0.53
CLDN1O95832 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN1O95832 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN1O95832 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.35■□□□□ 0.53
CLDN1O95832 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN1O95832 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN1O95832 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN1O95832 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN1O95832 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN1O95832 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN1O95832 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN1O95832 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN1O95832 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN1O95832 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN1O95832 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN1O95832 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN1O95832 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN1O95832 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN1O95832 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN1O95832 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN1O95832 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN1O95832 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN1O95832 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN1O95832 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN1O95832 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.34■□□□□ 0.53
CLDN1O95832 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN1O95832 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN1O95832 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN1O95832 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.34■□□□□ 0.53
CLDN1O95832 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.34■□□□□ 0.53
CLDN1O95832 RN7SL850P-201ENST00000579959 291 ntBASIC18.34■□□□□ 0.53
CLDN1O95832 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN1O95832 LINC01960-201ENST00000563759 1884 ntBASIC18.34■□□□□ 0.53
CLDN1O95832 LINC00526-201ENST00000581067 1875 ntBASIC18.34■□□□□ 0.53
CLDN1O95832 LINC00565-201ENST00000562710 2331 ntBASIC18.34■□□□□ 0.53
CLDN1O95832 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN1O95832 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN1O95832 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
CLDN1O95832 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN1O95832 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.33■□□□□ 0.53
CLDN1O95832 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.33■□□□□ 0.53
CLDN1O95832 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN1O95832 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
CLDN1O95832 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN1O95832 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CLDN1O95832 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN1O95832 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDN1O95832 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CLDN1O95832 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN1O95832 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN1O95832 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CLDN1O95832 POM121L13P-201ENST00000422362 380 ntBASIC18.33■□□□□ 0.52
CLDN1O95832 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
CLDN1O95832 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDN1O95832 MIR4785-201ENST00000585005 73 ntBASIC18.33■□□□□ 0.52
CLDN1O95832 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDN1O95832 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
CLDN1O95832 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN1O95832 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN1O95832 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN1O95832 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN1O95832 GUSBP5-202ENST00000510805 1989 ntBASIC18.32■□□□□ 0.52
CLDN1O95832 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms