Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
BEST1O76090 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
BEST1O76090 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
BEST1O76090 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BEST1O76090 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.66■■□□□ 1.06
BEST1O76090 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BEST1O76090 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BEST1O76090 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.66■■□□□ 1.06
BEST1O76090 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.66■■□□□ 1.06
BEST1O76090 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.66■■□□□ 1.06
BEST1O76090 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BEST1O76090 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
BEST1O76090 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.66■■□□□ 1.06
BEST1O76090 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
BEST1O76090 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
BEST1O76090 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
BEST1O76090 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.66■■□□□ 1.06
BEST1O76090 MIR4758-201ENST00000577688 71 ntBASIC21.66■■□□□ 1.06
BEST1O76090 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
BEST1O76090 AC092118.2-201ENST00000613495 667 ntBASIC21.66■■□□□ 1.06
BEST1O76090 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.66■■□□□ 1.06
BEST1O76090 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
BEST1O76090 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BEST1O76090 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BEST1O76090 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BEST1O76090 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BEST1O76090 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BEST1O76090 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.65■■□□□ 1.06
BEST1O76090 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BEST1O76090 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BEST1O76090 AC073210.2-201ENST00000430369 194 ntBASIC21.65■■□□□ 1.06
BEST1O76090 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.65■■□□□ 1.06
BEST1O76090 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.65■■□□□ 1.06
BEST1O76090 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.65■■□□□ 1.06
BEST1O76090 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BEST1O76090 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BEST1O76090 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.65■■□□□ 1.06
BEST1O76090 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
BEST1O76090 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
BEST1O76090 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
BEST1O76090 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
BEST1O76090 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
BEST1O76090 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
BEST1O76090 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.64■■□□□ 1.05
BEST1O76090 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BEST1O76090 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.64■■□□□ 1.05
BEST1O76090 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.64■■□□□ 1.05
BEST1O76090 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.64■■□□□ 1.05
BEST1O76090 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.64■■□□□ 1.05
BEST1O76090 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.64■■□□□ 1.05
BEST1O76090 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.64■■□□□ 1.05
BEST1O76090 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.64■■□□□ 1.05
BEST1O76090 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
BEST1O76090 AC133041.1-202ENST00000642053 222 ntBASIC21.64■■□□□ 1.05
BEST1O76090 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BEST1O76090 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BEST1O76090 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BEST1O76090 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BEST1O76090 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.63■■□□□ 1.05
BEST1O76090 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BEST1O76090 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BEST1O76090 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BEST1O76090 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
BEST1O76090 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
BEST1O76090 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
BEST1O76090 KRT18P68-201ENST00000392293 1000 ntBASIC21.63■■□□□ 1.05
BEST1O76090 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
BEST1O76090 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
BEST1O76090 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BEST1O76090 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.63■■□□□ 1.05
BEST1O76090 AC027702.1-201ENST00000563810 1770 ntBASIC21.63■■□□□ 1.05
BEST1O76090 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
BEST1O76090 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
BEST1O76090 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
BEST1O76090 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.62■■□□□ 1.05
BEST1O76090 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.62■■□□□ 1.05
BEST1O76090 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
BEST1O76090 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
BEST1O76090 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.62■■□□□ 1.05
BEST1O76090 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BEST1O76090 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BEST1O76090 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
BEST1O76090 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
BEST1O76090 LSM12P1-201ENST00000411836 588 ntBASIC21.62■■□□□ 1.05
BEST1O76090 DUSP5P2-201ENST00000426873 1033 ntBASIC21.62■■□□□ 1.05
BEST1O76090 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.62■■□□□ 1.05
BEST1O76090 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.62■■□□□ 1.05
BEST1O76090 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.62■■□□□ 1.05
BEST1O76090 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
BEST1O76090 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
BEST1O76090 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BEST1O76090 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
BEST1O76090 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.62■■□□□ 1.05
BEST1O76090 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
BEST1O76090 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.61■■□□□ 1.05
BEST1O76090 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.61■■□□□ 1.05
BEST1O76090 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BEST1O76090 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
BEST1O76090 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
BEST1O76090 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms