Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDKL5O76039 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDKL5O76039 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CDKL5O76039 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23.92■■□□□ 1.42
CDKL5O76039 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDKL5O76039 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.91■■□□□ 1.42
CDKL5O76039 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CDKL5O76039 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.91■■□□□ 1.42
CDKL5O76039 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.91■■□□□ 1.42
CDKL5O76039 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDKL5O76039 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CDKL5O76039 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CDKL5O76039 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CDKL5O76039 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDKL5O76039 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDKL5O76039 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDKL5O76039 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CDKL5O76039 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.91■■□□□ 1.42
CDKL5O76039 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.91■■□□□ 1.42
CDKL5O76039 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CDKL5O76039 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
CDKL5O76039 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.9■■□□□ 1.42
CDKL5O76039 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.9■■□□□ 1.42
CDKL5O76039 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDKL5O76039 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.9■■□□□ 1.42
CDKL5O76039 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
CDKL5O76039 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
CDKL5O76039 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
CDKL5O76039 AC013268.1-206ENST00000638368 961 ntBASIC23.9■■□□□ 1.42
CDKL5O76039 AC112229.1-201ENST00000639295 961 ntBASIC23.9■■□□□ 1.42
CDKL5O76039 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDKL5O76039 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDKL5O76039 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CDKL5O76039 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDKL5O76039 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDKL5O76039 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CDKL5O76039 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CDKL5O76039 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CDKL5O76039 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CDKL5O76039 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.89■■□□□ 1.42
CDKL5O76039 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
CDKL5O76039 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDKL5O76039 AC006015.1-201ENST00000429970 570 ntBASIC23.89■■□□□ 1.41
CDKL5O76039 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.89■■□□□ 1.41
CDKL5O76039 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.89■■□□□ 1.41
CDKL5O76039 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
CDKL5O76039 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC23.89■■□□□ 1.41
CDKL5O76039 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDKL5O76039 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDKL5O76039 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.89■■□□□ 1.41
CDKL5O76039 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDKL5O76039 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CDKL5O76039 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.88■■□□□ 1.41
CDKL5O76039 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDKL5O76039 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDKL5O76039 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDKL5O76039 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
CDKL5O76039 AC007322.4-201ENST00000509611 723 ntBASIC23.88■■□□□ 1.41
CDKL5O76039 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.88■■□□□ 1.41
CDKL5O76039 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.88■■□□□ 1.41
CDKL5O76039 MFSD11-216ENST00000590393 1141 ntBASIC23.88■■□□□ 1.41
CDKL5O76039 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDKL5O76039 AL591742.1-201ENST00000604433 565 ntBASIC23.88■■□□□ 1.41
CDKL5O76039 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
CDKL5O76039 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.88■■□□□ 1.41
CDKL5O76039 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDKL5O76039 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
CDKL5O76039 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
CDKL5O76039 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDKL5O76039 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDKL5O76039 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.87■■□□□ 1.41
CDKL5O76039 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDKL5O76039 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.87■■□□□ 1.41
CDKL5O76039 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDKL5O76039 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.87■■□□□ 1.41
CDKL5O76039 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDKL5O76039 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDKL5O76039 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
CDKL5O76039 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.87■■□□□ 1.41
CDKL5O76039 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
CDKL5O76039 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CDKL5O76039 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.87■■□□□ 1.41
CDKL5O76039 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
CDKL5O76039 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDKL5O76039 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.86■■□□□ 1.41
CDKL5O76039 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
CDKL5O76039 LINC01521-201ENST00000504184 1943 ntBASIC23.86■■□□□ 1.41
CDKL5O76039 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDKL5O76039 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.86■■□□□ 1.41
CDKL5O76039 AL157384.1-201ENST00000445995 2473 ntBASIC23.86■■□□□ 1.41
CDKL5O76039 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDKL5O76039 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.86■■□□□ 1.41
CDKL5O76039 AP005212.1-201ENST00000581547 1997 ntBASIC23.86■■□□□ 1.41
CDKL5O76039 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.86■■□□□ 1.41
CDKL5O76039 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.86■■□□□ 1.41
CDKL5O76039 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
CDKL5O76039 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.86■■□□□ 1.41
CDKL5O76039 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDKL5O76039 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDKL5O76039 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms