Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM3O75382 LINC01521-201ENST00000504184 1943 ntBASIC19.13■□□□□ 0.65
TRIM3O75382 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM3O75382 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM3O75382 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM3O75382 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM3O75382 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRIM3O75382 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM3O75382 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM3O75382 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM3O75382 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM3O75382 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM3O75382 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM3O75382 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRIM3O75382 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM3O75382 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.12■□□□□ 0.65
TRIM3O75382 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM3O75382 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRIM3O75382 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.12■□□□□ 0.65
TRIM3O75382 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.12■□□□□ 0.65
TRIM3O75382 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
TRIM3O75382 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM3O75382 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
TRIM3O75382 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM3O75382 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRIM3O75382 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TRIM3O75382 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM3O75382 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRIM3O75382 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.11■□□□□ 0.65
TRIM3O75382 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRIM3O75382 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM3O75382 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.11■□□□□ 0.65
TRIM3O75382 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.11■□□□□ 0.65
TRIM3O75382 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.11■□□□□ 0.65
TRIM3O75382 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM3O75382 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM3O75382 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.11■□□□□ 0.65
TRIM3O75382 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM3O75382 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.11■□□□□ 0.65
TRIM3O75382 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM3O75382 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.11■□□□□ 0.65
TRIM3O75382 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM3O75382 AC013268.1-206ENST00000638368 961 ntBASIC19.11■□□□□ 0.65
TRIM3O75382 AC112229.1-201ENST00000639295 961 ntBASIC19.11■□□□□ 0.65
TRIM3O75382 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM3O75382 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM3O75382 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM3O75382 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM3O75382 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM3O75382 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM3O75382 AC138932.1-201ENST00000534164 6830 ntBASIC19.11■□□□□ 0.65
TRIM3O75382 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM3O75382 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM3O75382 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM3O75382 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
TRIM3O75382 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TRIM3O75382 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM3O75382 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM3O75382 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM3O75382 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.1■□□□□ 0.65
TRIM3O75382 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRIM3O75382 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM3O75382 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM3O75382 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TRIM3O75382 MIR663A-201ENST00000385250 93 ntBASIC19.1■□□□□ 0.65
TRIM3O75382 AC006970.2-201ENST00000450065 779 ntBASIC19.1■□□□□ 0.65
TRIM3O75382 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM3O75382 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM3O75382 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM3O75382 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM3O75382 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRIM3O75382 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM3O75382 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM3O75382 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM3O75382 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM3O75382 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM3O75382 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.09■□□□□ 0.65
TRIM3O75382 AC007952.6-201ENST00000573168 2673 ntBASIC19.09■□□□□ 0.65
TRIM3O75382 AC003957.1-201ENST00000625108 2673 ntBASIC19.09■□□□□ 0.65
TRIM3O75382 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TRIM3O75382 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM3O75382 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.09■□□□□ 0.65
TRIM3O75382 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM3O75382 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM3O75382 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM3O75382 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.09■□□□□ 0.65
TRIM3O75382 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
TRIM3O75382 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM3O75382 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM3O75382 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TRIM3O75382 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM3O75382 ID1-201ENST00000376105 1233 ntBASIC19.09■□□□□ 0.65
TRIM3O75382 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM3O75382 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM3O75382 AC007322.4-201ENST00000509611 723 ntBASIC19.09■□□□□ 0.65
TRIM3O75382 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM3O75382 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM3O75382 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.09■□□□□ 0.65
TRIM3O75382 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM3O75382 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms