Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PCDHGA12O60330 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHGA12O60330 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA12O60330 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA12O60330 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDHGA12O60330 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA12O60330 AL589743.5-201ENST00000616611 1050 ntBASIC20.39■□□□□ 0.85
PCDHGA12O60330 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PCDHGA12O60330 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA12O60330 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHGA12O60330 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
PCDHGA12O60330 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PCDHGA12O60330 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.39■□□□□ 0.85
PCDHGA12O60330 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA12O60330 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDHGA12O60330 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA12O60330 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA12O60330 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA12O60330 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
PCDHGA12O60330 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA12O60330 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
PCDHGA12O60330 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
PCDHGA12O60330 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA12O60330 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA12O60330 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA12O60330 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PCDHGA12O60330 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.38■□□□□ 0.85
PCDHGA12O60330 AL359736.2-201ENST00000621992 437 ntBASIC20.38■□□□□ 0.85
PCDHGA12O60330 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA12O60330 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA12O60330 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA12O60330 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA12O60330 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDHGA12O60330 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.38■□□□□ 0.85
PCDHGA12O60330 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA12O60330 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDHGA12O60330 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDHGA12O60330 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGA12O60330 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHGA12O60330 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDHGA12O60330 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
PCDHGA12O60330 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHGA12O60330 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.37■□□□□ 0.85
PCDHGA12O60330 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.37■□□□□ 0.85
PCDHGA12O60330 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PCDHGA12O60330 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PCDHGA12O60330 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 FBXW4P1-201ENST00000426721 2239 ntBASIC20.37■□□□□ 0.85
PCDHGA12O60330 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDHGA12O60330 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA12O60330 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDHGA12O60330 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
PCDHGA12O60330 MCRIP2P1-201ENST00000394346 511 ntBASIC20.36■□□□□ 0.85
PCDHGA12O60330 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDHGA12O60330 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGA12O60330 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA12O60330 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
PCDHGA12O60330 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA12O60330 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGA12O60330 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGA12O60330 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDHGA12O60330 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PCDHGA12O60330 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA12O60330 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
PCDHGA12O60330 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDHGA12O60330 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDHGA12O60330 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDHGA12O60330 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
PCDHGA12O60330 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
PCDHGA12O60330 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA12O60330 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA12O60330 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA12O60330 MIR718-201ENST00000390190 70 ntBASIC20.35■□□□□ 0.85
PCDHGA12O60330 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA12O60330 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDHGA12O60330 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA12O60330 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA12O60330 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PCDHGA12O60330 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDHGA12O60330 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.35■□□□□ 0.85
PCDHGA12O60330 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.35■□□□□ 0.85
PCDHGA12O60330 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms