Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.7■□□□□ 0.42
PHF1O43189 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHF1O43189 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHF1O43189 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHF1O43189 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PHF1O43189 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.7■□□□□ 0.42
PHF1O43189 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PHF1O43189 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
PHF1O43189 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.7■□□□□ 0.42
PHF1O43189 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.7■□□□□ 0.42
PHF1O43189 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.7■□□□□ 0.42
PHF1O43189 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.7■□□□□ 0.42
PHF1O43189 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.7■□□□□ 0.42
PHF1O43189 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHF1O43189 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PHF1O43189 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PHF1O43189 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.7■□□□□ 0.42
PHF1O43189 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHF1O43189 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.69■□□□□ 0.42
PHF1O43189 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHF1O43189 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHF1O43189 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHF1O43189 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PHF1O43189 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHF1O43189 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHF1O43189 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHF1O43189 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.69■□□□□ 0.42
PHF1O43189 GUSBP6-202ENST00000438529 1198 ntBASIC17.69■□□□□ 0.42
PHF1O43189 SLC7A5P2-201ENST00000553010 536 ntBASIC17.69■□□□□ 0.42
PHF1O43189 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PHF1O43189 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.69■□□□□ 0.42
PHF1O43189 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.69■□□□□ 0.42
PHF1O43189 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHF1O43189 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHF1O43189 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PHF1O43189 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PHF1O43189 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHF1O43189 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
PHF1O43189 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PHF1O43189 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.69■□□□□ 0.42
PHF1O43189 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.68■□□□□ 0.42
PHF1O43189 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHF1O43189 LINC01521-201ENST00000504184 1943 ntBASIC17.68■□□□□ 0.42
PHF1O43189 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.68■□□□□ 0.42
PHF1O43189 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHF1O43189 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHF1O43189 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHF1O43189 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PHF1O43189 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHF1O43189 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHF1O43189 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHF1O43189 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PHF1O43189 AC069152.1-201ENST00000438030 544 ntBASIC17.68■□□□□ 0.42
PHF1O43189 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHF1O43189 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PHF1O43189 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PHF1O43189 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.68■□□□□ 0.42
PHF1O43189 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.68■□□□□ 0.42
PHF1O43189 MFSD11-216ENST00000590393 1141 ntBASIC17.68■□□□□ 0.42
PHF1O43189 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.68■□□□□ 0.42
PHF1O43189 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.68■□□□□ 0.42
PHF1O43189 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.68■□□□□ 0.42
PHF1O43189 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHF1O43189 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PHF1O43189 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PHF1O43189 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PHF1O43189 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHF1O43189 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHF1O43189 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.67■□□□□ 0.42
PHF1O43189 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHF1O43189 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHF1O43189 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PHF1O43189 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.67■□□□□ 0.42
PHF1O43189 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHF1O43189 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
PHF1O43189 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PHF1O43189 KRT18P29-201ENST00000397031 1267 ntBASIC17.67■□□□□ 0.42
PHF1O43189 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHF1O43189 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.67■□□□□ 0.42
PHF1O43189 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.67■□□□□ 0.42
PHF1O43189 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PHF1O43189 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHF1O43189 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHF1O43189 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PHF1O43189 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PHF1O43189 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PHF1O43189 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHF1O43189 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PHF1O43189 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PHF1O43189 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PHF1O43189 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHF1O43189 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.66■□□□□ 0.42
PHF1O43189 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHF1O43189 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
PHF1O43189 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PHF1O43189 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PHF1O43189 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.66■□□□□ 0.42
PHF1O43189 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
PHF1O43189 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.66■□□□□ 0.42
PHF1O43189 AC005181.1-201ENST00000604782 1256 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms