Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.95■□□□□ 0.62
CPSF4LA6NMK7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.95■□□□□ 0.62
CPSF4LA6NMK7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF4LA6NMK7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF4LA6NMK7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF4LA6NMK7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CPSF4LA6NMK7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF4LA6NMK7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF4LA6NMK7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF4LA6NMK7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.95■□□□□ 0.62
CPSF4LA6NMK7 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF4LA6NMK7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF4LA6NMK7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF4LA6NMK7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPSF4LA6NMK7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.95■□□□□ 0.62
CPSF4LA6NMK7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 AC020907.5-201ENST00000624372 1936 ntBASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 AC027612.3-201ENST00000413684 1047 ntBASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 PCDHAC2-203ENST00000615316 3011 ntBASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPSF4LA6NMK7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.93■□□□□ 0.62
CPSF4LA6NMK7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 AC138907.5-202ENST00000569484 235 ntBASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPSF4LA6NMK7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CPSF4LA6NMK7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF4LA6NMK7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF4LA6NMK7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF4LA6NMK7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF4LA6NMK7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.91■□□□□ 0.62
CPSF4LA6NMK7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.91■□□□□ 0.62
CPSF4LA6NMK7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF4LA6NMK7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF4LA6NMK7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF4LA6NMK7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF4LA6NMK7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPSF4LA6NMK7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.91■□□□□ 0.62
CPSF4LA6NMK7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.91■□□□□ 0.62
CPSF4LA6NMK7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CPSF4LA6NMK7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CPSF4LA6NMK7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CPSF4LA6NMK7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms