Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 PGM5P4-201ENST00000421970 445 ntBASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 REXO1L12P-201ENST00000622156 912 ntBASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 AC087633.2-202ENST00000565166 1439 ntBASIC19.57■□□□□ 0.72
CCDC187A0A096LP49 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 MTDHP1-201ENST00000605323 784 ntBASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC187A0A096LP49 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 AC012676.1-201ENST00000574705 1949 ntBASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 AC233702.5-201ENST00000584107 538 ntBASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC187A0A096LP49 KRT17P2-201ENST00000300992 1314 ntBASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 RPS2P55-201ENST00000397318 883 ntBASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 AC211429.1-201ENST00000415277 523 ntBASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 AC107956.1-201ENST00000494359 873 ntBASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC187A0A096LP49 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 AC239809.2-201ENST00000415381 517 ntBASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 AC133681.1-201ENST00000465482 601 ntBASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 LINC01023-201ENST00000606054 436 ntBASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 AP001412.1-201ENST00000608405 714 ntBASIC19.53■□□□□ 0.72
CCDC187A0A096LP49 AC124016.1-201ENST00000609552 612 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms