Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SYCE2Q6PIF2 GP2-204ENST00000381362 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SYCE2Q6PIF2 PNPLA1-201ENST00000312917 1518 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SYCE2Q6PIF2 LINC01734-201ENST00000412672 1518 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SYCE2Q6PIF2 C1QTNF7-205ENST00000444304 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SYCE2Q6PIF2 COL4A6-203ENST00000394872 6750 ntTSL 5 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 ZNF675-209ENST00000601935 1444 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 AL138690.1-201ENST00000568811 2243 ntBASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 SEC14L3-202ENST00000401751 1794 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 AC079316.2-201ENST00000623545 1375 ntBASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 ICA1-205ENST00000401396 1742 ntTSL 5 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 AC078846.1-201ENST00000608694 7083 ntBASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 TEX14-202ENST00000349033 4773 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 TUBB-207ENST00000396384 2823 ntTSL 3 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 TUBA1C-202ENST00000541364 1695 ntTSL 2 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 RSPRY1-201ENST00000394420 3547 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 MPV17-202ENST00000357186 2011 ntTSL 2 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 ACTN1-203ENST00000394419 3464 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 NUP62-202ENST00000422090 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 S100A7A-201ENST00000329256 491 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 KRBOX1-201ENST00000383748 674 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 KRTAP9-9-201ENST00000394008 981 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 CAPN3-208ENST00000397204 1237 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 SEM1-203ENST00000413065 661 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 CYCSP5-201ENST00000415043 297 ntBASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 LINC01468-202ENST00000435813 975 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 AC080013.1-205ENST00000477589 1087 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 RN7SL702P-201ENST00000488394 292 ntBASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 AC092807.3-202ENST00000498304 508 ntTSL 3 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 AC063980.1-201ENST00000514282 414 ntTSL 3 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 RAB6A-209ENST00000541973 1104 ntTSL 2 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 LINC01227-202ENST00000561719 755 ntTSL 2 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 HP-207ENST00000562526 685 ntTSL 3 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 AC010536.2-201ENST00000563036 338 ntTSL 3 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 PMM2-213ENST00000566983 907 ntTSL 5 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 AC087164.1-201ENST00000577847 513 ntTSL 3 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 OR12D2-206ENST00000623183 1069 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 AL139220.2-211ENST00000628234 754 ntTSL 5 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 ASAH1-229ENST00000636537 1056 ntTSL 2 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 EXOSC2-211ENST00000546165 1956 ntTSL 2 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 DNAAF4-204ENST00000457155 1567 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 ADCY5-210ENST00000491190 3962 ntTSL 2 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 RBMY1A1-204ENST00000439108 1879 ntAPPRIS P5 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 BVES-203ENST00000446408 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 AC006946.2-201ENST00000608373 2855 ntBASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 SLC22A11-201ENST00000301891 3860 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 FAM186B-205ENST00000551047 2173 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 ZP4-202ENST00000611898 2474 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 EPSTI1-201ENST00000313624 3114 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 MYF6-201ENST00000228641 1465 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 RBMS2-207ENST00000552247 1471 ntTSL 5 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 NOP2-218ENST00000545200 2751 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 PFKM-225ENST00000551804 2797 ntTSL 5 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 LINC01012-204ENST00000629732 2771 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 STAT1-204ENST00000409465 3097 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 CFAP44-201ENST00000295868 3377 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 CARD8-213ENST00000519940 2056 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
SYCE2Q6PIF2 BACH2-202ENST00000343122 3981 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 GFOD1-202ENST00000379284 8061 ntTSL 2 BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 LYPD4-203ENST00000609812 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 PNPLA1-202ENST00000388715 2332 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 DICER1-AS1-203ENST00000439999 2323 ntTSL 2 BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 PTPN20-202ENST00000374339 1388 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 DLSTP1-201ENST00000444241 1354 ntBASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 GPR50-201ENST00000218316 1951 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 MYEF2-216ENST00000616409 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 HMBOX1-201ENST00000287701 3184 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 RPAP3-201ENST00000005386 4370 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 SYBU-202ENST00000399066 3435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 FGD3-203ENST00000416701 3432 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 CTAGE5-214ENST00000556148 2526 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 AKR1D1-202ENST00000411726 2234 ntTSL 2 BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 VWA5A-201ENST00000361352 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 SHPRH-206ENST00000438092 6994 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 IL13-201ENST00000304506 1283 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 FAM3B-202ENST00000398646 1026 ntTSL 5 BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 OR51A8P-201ENST00000421277 940 ntBASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 AL589935.1-204ENST00000423255 407 ntTSL 3 BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 AC092098.1-201ENST00000429245 874 ntBASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 AL031729.1-201ENST00000433132 192 ntBASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 AL355149.1-201ENST00000438396 882 ntBASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 MTND6P15-201ENST00000441157 521 ntBASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 AC073254.1-202ENST00000447488 640 ntTSL 3 BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 HIST1H2APS5-201ENST00000454320 369 ntBASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 NDUFB11P1-201ENST00000455818 465 ntBASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 LINC02115-201ENST00000503367 432 ntTSL 5 BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 RBM48P1-201ENST00000509661 1102 ntBASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 AC006499.1-201ENST00000511870 850 ntBASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 COX6C-202ENST00000517682 429 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 UBE2N-206ENST00000552442 607 ntTSL 5 BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 LRP1-AS-202ENST00000555461 645 ntTSL 2 BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 AC079789.1-201ENST00000561655 885 ntBASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 ARPP19-209ENST00000567669 745 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 AC004253.2-201ENST00000585025 397 ntTSL 3 BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 AF038458.3-201ENST00000592518 500 ntTSL 3 BASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 uc_338.3-201ENST00000613268 181 ntBASIC9.9□□□□□ -0.82
SYCE2Q6PIF2 Metazoa_SRP.165-201ENST00000615681 260 ntBASIC9.9□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms