Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RTCBQ9Y3I0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC26.23■■□□□ 1.79
RTCBQ9Y3I0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RTCBQ9Y3I0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
RTCBQ9Y3I0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
RTCBQ9Y3I0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC26.23■■□□□ 1.79
RTCBQ9Y3I0 KRASP1-201ENST00000407852 552 ntBASIC26.23■■□□□ 1.79
RTCBQ9Y3I0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RTCBQ9Y3I0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RTCBQ9Y3I0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC26.23■■□□□ 1.79
RTCBQ9Y3I0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC26.23■■□□□ 1.79
RTCBQ9Y3I0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
RTCBQ9Y3I0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
RTCBQ9Y3I0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RTCBQ9Y3I0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC26.23■■□□□ 1.79
RTCBQ9Y3I0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
RTCBQ9Y3I0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC26.22■■□□□ 1.79
RTCBQ9Y3I0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
RTCBQ9Y3I0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RTCBQ9Y3I0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC26.22■■□□□ 1.79
RTCBQ9Y3I0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
RTCBQ9Y3I0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC26.22■■□□□ 1.79
RTCBQ9Y3I0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RTCBQ9Y3I0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC26.22■■□□□ 1.79
RTCBQ9Y3I0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RTCBQ9Y3I0 AC005829.2-201ENST00000571422 1056 ntBASIC26.22■■□□□ 1.79
RTCBQ9Y3I0 AC006557.6-201ENST00000623071 864 ntBASIC26.22■■□□□ 1.79
RTCBQ9Y3I0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RTCBQ9Y3I0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTCBQ9Y3I0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RTCBQ9Y3I0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC26.22■■□□□ 1.79
RTCBQ9Y3I0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 AC080038.3-201ENST00000623346 1952 ntBASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC26.21■■□□□ 1.79
RTCBQ9Y3I0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RTCBQ9Y3I0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RTCBQ9Y3I0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
RTCBQ9Y3I0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
RTCBQ9Y3I0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RTCBQ9Y3I0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RTCBQ9Y3I0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
RTCBQ9Y3I0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RTCBQ9Y3I0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC26.2■■□□□ 1.78
RTCBQ9Y3I0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RTCBQ9Y3I0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
RTCBQ9Y3I0 AC097493.4-201ENST00000641197 219 ntBASIC26.2■■□□□ 1.78
RTCBQ9Y3I0 AC087633.2-202ENST00000565166 1439 ntBASIC26.2■■□□□ 1.78
RTCBQ9Y3I0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTCBQ9Y3I0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
RTCBQ9Y3I0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
RTCBQ9Y3I0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RTCBQ9Y3I0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
RTCBQ9Y3I0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RTCBQ9Y3I0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
RTCBQ9Y3I0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
RTCBQ9Y3I0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
RTCBQ9Y3I0 PRKY-204ENST00000533551 1019 ntBASIC26.18■■□□□ 1.78
RTCBQ9Y3I0 AL355075.4-201ENST00000554988 638 ntBASIC26.18■■□□□ 1.78
RTCBQ9Y3I0 TK2-213ENST00000563369 882 ntTSL 5 BASIC26.18■■□□□ 1.78
RTCBQ9Y3I0 RARRES2P10-201ENST00000564312 460 ntBASIC26.18■■□□□ 1.78
RTCBQ9Y3I0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC26.18■■□□□ 1.78
RTCBQ9Y3I0 AC012306.2-201ENST00000609350 630 ntBASIC26.18■■□□□ 1.78
RTCBQ9Y3I0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
RTCBQ9Y3I0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC26.18■■□□□ 1.78
RTCBQ9Y3I0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.18■■□□□ 1.78
RTCBQ9Y3I0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms