Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC28.35■■■□□ 2.13
NINLQ9Y2I6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
NINLQ9Y2I6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
NINLQ9Y2I6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
NINLQ9Y2I6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
NINLQ9Y2I6 PGM5P4-201ENST00000421970 445 ntBASIC28.35■■■□□ 2.13
NINLQ9Y2I6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC28.35■■■□□ 2.13
NINLQ9Y2I6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC28.35■■■□□ 2.13
NINLQ9Y2I6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
NINLQ9Y2I6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
NINLQ9Y2I6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
NINLQ9Y2I6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC28.34■■■□□ 2.13
NINLQ9Y2I6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NINLQ9Y2I6 EP400NL-214ENST00000641289 2402 ntBASIC28.34■■■□□ 2.13
NINLQ9Y2I6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC28.34■■■□□ 2.13
NINLQ9Y2I6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC28.34■■■□□ 2.13
NINLQ9Y2I6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
NINLQ9Y2I6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NINLQ9Y2I6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC28.34■■■□□ 2.13
NINLQ9Y2I6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
NINLQ9Y2I6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC28.34■■■□□ 2.13
NINLQ9Y2I6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC28.34■■■□□ 2.13
NINLQ9Y2I6 HES2-205ENST00000487437 968 ntTSL 3 BASIC28.34■■■□□ 2.13
NINLQ9Y2I6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC28.34■■■□□ 2.13
NINLQ9Y2I6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
NINLQ9Y2I6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
NINLQ9Y2I6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
NINLQ9Y2I6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
NINLQ9Y2I6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
NINLQ9Y2I6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC28.33■■■□□ 2.13
NINLQ9Y2I6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
NINLQ9Y2I6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
NINLQ9Y2I6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC28.32■■■□□ 2.12
NINLQ9Y2I6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
NINLQ9Y2I6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC28.32■■■□□ 2.12
NINLQ9Y2I6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NINLQ9Y2I6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
NINLQ9Y2I6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
NINLQ9Y2I6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
NINLQ9Y2I6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC28.31■■■□□ 2.12
NINLQ9Y2I6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
NINLQ9Y2I6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
NINLQ9Y2I6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
NINLQ9Y2I6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
NINLQ9Y2I6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
NINLQ9Y2I6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
NINLQ9Y2I6 AL596275.1-201ENST00000423464 877 ntBASIC28.31■■■□□ 2.12
NINLQ9Y2I6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC28.31■■■□□ 2.12
NINLQ9Y2I6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
NINLQ9Y2I6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC28.31■■■□□ 2.12
NINLQ9Y2I6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC28.31■■■□□ 2.12
NINLQ9Y2I6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC28.31■■■□□ 2.12
NINLQ9Y2I6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
NINLQ9Y2I6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NINLQ9Y2I6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
NINLQ9Y2I6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NINLQ9Y2I6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC28.3■■■□□ 2.12
NINLQ9Y2I6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NINLQ9Y2I6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC28.3■■■□□ 2.12
NINLQ9Y2I6 AP003097.1-201ENST00000530657 1135 ntBASIC28.3■■■□□ 2.12
NINLQ9Y2I6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC28.3■■■□□ 2.12
NINLQ9Y2I6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NINLQ9Y2I6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NINLQ9Y2I6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
NINLQ9Y2I6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC28.3■■■□□ 2.12
NINLQ9Y2I6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
NINLQ9Y2I6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
NINLQ9Y2I6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
NINLQ9Y2I6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
NINLQ9Y2I6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NINLQ9Y2I6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NINLQ9Y2I6 ESRRAP1-201ENST00000400596 1257 ntBASIC28.29■■■□□ 2.12
NINLQ9Y2I6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC28.29■■■□□ 2.12
NINLQ9Y2I6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC28.29■■■□□ 2.12
NINLQ9Y2I6 AC098590.1-201ENST00000468126 897 ntBASIC28.29■■■□□ 2.12
NINLQ9Y2I6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
NINLQ9Y2I6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
NINLQ9Y2I6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
NINLQ9Y2I6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
NINLQ9Y2I6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC28.29■■■□□ 2.12
NINLQ9Y2I6 Z98882.1-201ENST00000622160 2253 ntBASIC28.29■■■□□ 2.12
NINLQ9Y2I6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC28.28■■■□□ 2.12
NINLQ9Y2I6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
NINLQ9Y2I6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
NINLQ9Y2I6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC28.28■■■□□ 2.12
NINLQ9Y2I6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NINLQ9Y2I6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NINLQ9Y2I6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC28.28■■■□□ 2.12
NINLQ9Y2I6 AC026366.1-201ENST00000488803 879 ntBASIC28.28■■■□□ 2.12
NINLQ9Y2I6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC28.28■■■□□ 2.12
NINLQ9Y2I6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
NINLQ9Y2I6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
NINLQ9Y2I6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC28.28■■■□□ 2.12
NINLQ9Y2I6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
NINLQ9Y2I6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
NINLQ9Y2I6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC28.27■■■□□ 2.12
NINLQ9Y2I6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC28.27■■■□□ 2.12
NINLQ9Y2I6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC28.27■■■□□ 2.12
NINLQ9Y2I6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
NINLQ9Y2I6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms