Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
RNF216Q9NWF9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF216Q9NWF9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.4■■□□□ 1.34
RNF216Q9NWF9 AC007322.1-201ENST00000426983 750 ntBASIC23.4■■□□□ 1.34
RNF216Q9NWF9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RNF216Q9NWF9 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC23.4■■□□□ 1.34
RNF216Q9NWF9 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC23.4■■□□□ 1.34
RNF216Q9NWF9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF216Q9NWF9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF216Q9NWF9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF216Q9NWF9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF216Q9NWF9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RNF216Q9NWF9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.39■■□□□ 1.34
RNF216Q9NWF9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.39■■□□□ 1.34
RNF216Q9NWF9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
RNF216Q9NWF9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
RNF216Q9NWF9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
RNF216Q9NWF9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
RNF216Q9NWF9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.39■■□□□ 1.33
RNF216Q9NWF9 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC23.39■■□□□ 1.33
RNF216Q9NWF9 AP001160.3-201ENST00000601484 763 ntBASIC23.39■■□□□ 1.33
RNF216Q9NWF9 AL121832.2-201ENST00000610979 668 ntBASIC23.39■■□□□ 1.33
RNF216Q9NWF9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.39■■□□□ 1.33
RNF216Q9NWF9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
RNF216Q9NWF9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RNF216Q9NWF9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.39■■□□□ 1.33
RNF216Q9NWF9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RNF216Q9NWF9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.39■■□□□ 1.33
RNF216Q9NWF9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 AL355802.2-201ENST00000402069 882 ntBASIC23.38■■□□□ 1.33
RNF216Q9NWF9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF216Q9NWF9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
RNF216Q9NWF9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF216Q9NWF9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RNF216Q9NWF9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF216Q9NWF9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RNF216Q9NWF9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF216Q9NWF9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF216Q9NWF9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RNF216Q9NWF9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF216Q9NWF9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
RNF216Q9NWF9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.37■■□□□ 1.33
RNF216Q9NWF9 AC020763.2-201ENST00000623155 1255 ntBASIC23.37■■□□□ 1.33
RNF216Q9NWF9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF216Q9NWF9 AC055733.4-201ENST00000638462 1354 ntBASIC23.37■■□□□ 1.33
RNF216Q9NWF9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF216Q9NWF9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
RNF216Q9NWF9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
RNF216Q9NWF9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF216Q9NWF9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF216Q9NWF9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
RNF216Q9NWF9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
RNF216Q9NWF9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
RNF216Q9NWF9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.36■■□□□ 1.33
RNF216Q9NWF9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF216Q9NWF9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF216Q9NWF9 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC23.36■■□□□ 1.33
RNF216Q9NWF9 AC118282.1-201ENST00000506408 765 ntBASIC23.36■■□□□ 1.33
RNF216Q9NWF9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.36■■□□□ 1.33
RNF216Q9NWF9 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC23.36■■□□□ 1.33
RNF216Q9NWF9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
RNF216Q9NWF9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.36■■□□□ 1.33
RNF216Q9NWF9 MYCNOS-205ENST00000641950 531 ntBASIC23.36■■□□□ 1.33
RNF216Q9NWF9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF216Q9NWF9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
RNF216Q9NWF9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF216Q9NWF9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RNF216Q9NWF9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RNF216Q9NWF9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.35■■□□□ 1.33
RNF216Q9NWF9 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.35■■□□□ 1.33
RNF216Q9NWF9 LINC01960-201ENST00000563759 1884 ntBASIC23.35■■□□□ 1.33
RNF216Q9NWF9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF216Q9NWF9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RNF216Q9NWF9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
RNF216Q9NWF9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RNF216Q9NWF9 MTND2P11-201ENST00000423638 648 ntBASIC23.35■■□□□ 1.33
RNF216Q9NWF9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.35■■□□□ 1.33
RNF216Q9NWF9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.35■■□□□ 1.33
RNF216Q9NWF9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.35■■□□□ 1.33
RNF216Q9NWF9 UBE2DNL-204ENST00000602536 740 ntBASIC23.35■■□□□ 1.33
RNF216Q9NWF9 AP000280.1-201ENST00000624800 832 ntBASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms