Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
SLC52A1Q9NWF4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SLC52A1Q9NWF4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
SLC52A1Q9NWF4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SLC52A1Q9NWF4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC29.83■■■□□ 2.37
SLC52A1Q9NWF4 AC110285.5-201ENST00000611501 352 ntBASIC29.83■■■□□ 2.37
SLC52A1Q9NWF4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
SLC52A1Q9NWF4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
SLC52A1Q9NWF4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 AC239809.2-201ENST00000415381 517 ntBASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC29.82■■■□□ 2.36
SLC52A1Q9NWF4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC29.81■■■□□ 2.36
SLC52A1Q9NWF4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC29.81■■■□□ 2.36
SLC52A1Q9NWF4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SLC52A1Q9NWF4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC29.81■■■□□ 2.36
SLC52A1Q9NWF4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC29.81■■■□□ 2.36
SLC52A1Q9NWF4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SLC52A1Q9NWF4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
SLC52A1Q9NWF4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC29.81■■■□□ 2.36
SLC52A1Q9NWF4 AC010331.1-201ENST00000611423 582 ntBASIC29.81■■■□□ 2.36
SLC52A1Q9NWF4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC29.81■■■□□ 2.36
SLC52A1Q9NWF4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
SLC52A1Q9NWF4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
SLC52A1Q9NWF4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC29.81■■■□□ 2.36
SLC52A1Q9NWF4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC29.81■■■□□ 2.36
SLC52A1Q9NWF4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC29.8■■■□□ 2.36
SLC52A1Q9NWF4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
SLC52A1Q9NWF4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SLC52A1Q9NWF4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SLC52A1Q9NWF4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
SLC52A1Q9NWF4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC29.8■■■□□ 2.36
SLC52A1Q9NWF4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
SLC52A1Q9NWF4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SLC52A1Q9NWF4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC29.8■■■□□ 2.36
SLC52A1Q9NWF4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
SLC52A1Q9NWF4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC29.8■■■□□ 2.36
SLC52A1Q9NWF4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC29.8■■■□□ 2.36
SLC52A1Q9NWF4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SLC52A1Q9NWF4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC29.79■■■□□ 2.36
SLC52A1Q9NWF4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SLC52A1Q9NWF4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
SLC52A1Q9NWF4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC29.79■■■□□ 2.36
SLC52A1Q9NWF4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
SLC52A1Q9NWF4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC29.79■■■□□ 2.36
SLC52A1Q9NWF4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC29.79■■■□□ 2.36
SLC52A1Q9NWF4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC29.79■■■□□ 2.36
SLC52A1Q9NWF4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
SLC52A1Q9NWF4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SLC52A1Q9NWF4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
SLC52A1Q9NWF4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC29.79■■■□□ 2.36
SLC52A1Q9NWF4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SLC52A1Q9NWF4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 PGM5P4-201ENST00000421970 445 ntBASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 MIR4785-201ENST00000585005 73 ntBASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC29.78■■■□□ 2.36
SLC52A1Q9NWF4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
SLC52A1Q9NWF4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SLC52A1Q9NWF4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SLC52A1Q9NWF4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
SLC52A1Q9NWF4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
SLC52A1Q9NWF4 RARRES2P10-201ENST00000564312 460 ntBASIC29.77■■■□□ 2.36
SLC52A1Q9NWF4 AC113410.3-201ENST00000623366 203 ntBASIC29.77■■■□□ 2.36
SLC52A1Q9NWF4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SLC52A1Q9NWF4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SLC52A1Q9NWF4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
SLC52A1Q9NWF4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC29.76■■■□□ 2.36
SLC52A1Q9NWF4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC29.76■■■□□ 2.36
SLC52A1Q9NWF4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.36
SLC52A1Q9NWF4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC29.76■■■□□ 2.36
SLC52A1Q9NWF4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms