Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 AC006128.1-201ENST00000624704 1661 ntBASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.48■□□□□ 0.71
PRDM9Q9NQV7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 AL137060.1-201ENST00000618151 2648 ntBASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 CYP2T1P-201ENST00000432607 1285 ntBASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 CDV3P1-201ENST00000471403 739 ntBASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRDM9Q9NQV7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 AC069236.1-201ENST00000604339 616 ntBASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 AL050303.2-201ENST00000619798 666 ntBASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRDM9Q9NQV7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.45■□□□□ 0.7
PRDM9Q9NQV7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PRDM9Q9NQV7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PRDM9Q9NQV7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRDM9Q9NQV7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRDM9Q9NQV7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.45■□□□□ 0.7
PRDM9Q9NQV7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.45■□□□□ 0.7
PRDM9Q9NQV7 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.45■□□□□ 0.7
PRDM9Q9NQV7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.45■□□□□ 0.7
PRDM9Q9NQV7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.45■□□□□ 0.7
PRDM9Q9NQV7 AC008694.1-202ENST00000636953 945 ntBASIC19.45■□□□□ 0.7
PRDM9Q9NQV7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRDM9Q9NQV7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRDM9Q9NQV7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRDM9Q9NQV7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.45■□□□□ 0.7
PRDM9Q9NQV7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRDM9Q9NQV7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 NCF1B-203ENST00000435988 1254 ntBASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 AC133552.2-202ENST00000575694 574 ntBASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.44■□□□□ 0.7
PRDM9Q9NQV7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms