Protein–RNA interactions for Protein: Q9NQP4

PFDN4, Prefoldin subunit 4, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4Q9NQP4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PFDN4Q9NQP4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN4Q9NQP4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN4Q9NQP4 GABARAPL3-202ENST00000624044 1851 ntBASIC20.22■□□□□ 0.83
PFDN4Q9NQP4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN4Q9NQP4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN4Q9NQP4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN4Q9NQP4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.22■□□□□ 0.83
PFDN4Q9NQP4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.22■□□□□ 0.83
PFDN4Q9NQP4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PFDN4Q9NQP4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
PFDN4Q9NQP4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.22■□□□□ 0.83
PFDN4Q9NQP4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN4Q9NQP4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.22■□□□□ 0.83
PFDN4Q9NQP4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN4Q9NQP4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN4Q9NQP4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.22■□□□□ 0.83
PFDN4Q9NQP4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PFDN4Q9NQP4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 AC007952.6-201ENST00000573168 2673 ntBASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 AC003957.1-201ENST00000625108 2673 ntBASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PFDN4Q9NQP4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PFDN4Q9NQP4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PFDN4Q9NQP4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PFDN4Q9NQP4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PFDN4Q9NQP4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PFDN4Q9NQP4 AL136967.2-201ENST00000623968 743 ntBASIC20.2■□□□□ 0.82
PFDN4Q9NQP4 AC105233.4-201ENST00000642045 216 ntBASIC20.2■□□□□ 0.82
PFDN4Q9NQP4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.2■□□□□ 0.82
PFDN4Q9NQP4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PFDN4Q9NQP4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PFDN4Q9NQP4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PFDN4Q9NQP4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PFDN4Q9NQP4 AC055733.4-201ENST00000638462 1354 ntBASIC20.2■□□□□ 0.82
PFDN4Q9NQP4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
PFDN4Q9NQP4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 PLK5-205ENST00000642079 1969 ntBASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
PFDN4Q9NQP4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 AL031432.3-201ENST00000607698 485 ntBASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PFDN4Q9NQP4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms