Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM55Q9BYV6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM55Q9BYV6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM55Q9BYV6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM55Q9BYV6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM55Q9BYV6 AFG3L1P-217ENST00000557444 2447 ntBASIC20.74■□□□□ 0.91
TRIM55Q9BYV6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM55Q9BYV6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM55Q9BYV6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM55Q9BYV6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 AC068587.7-201ENST00000641602 218 ntBASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM55Q9BYV6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 CCDC92B-201ENST00000575506 885 ntBASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 PLK5-205ENST00000642079 1969 ntBASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 AC003102.1-202ENST00000563394 1796 ntBASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM55Q9BYV6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM55Q9BYV6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM55Q9BYV6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
TRIM55Q9BYV6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM55Q9BYV6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.71■□□□□ 0.91
TRIM55Q9BYV6 AC004911.1-201ENST00000416316 871 ntBASIC20.71■□□□□ 0.91
TRIM55Q9BYV6 AL354811.1-201ENST00000610286 706 ntBASIC20.71■□□□□ 0.91
TRIM55Q9BYV6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.71■□□□□ 0.91
TRIM55Q9BYV6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM55Q9BYV6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM55Q9BYV6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRIM55Q9BYV6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM55Q9BYV6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TRIM55Q9BYV6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM55Q9BYV6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM55Q9BYV6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM55Q9BYV6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM55Q9BYV6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM55Q9BYV6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM55Q9BYV6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM55Q9BYV6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.7■□□□□ 0.9
TRIM55Q9BYV6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM55Q9BYV6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.7■□□□□ 0.9
TRIM55Q9BYV6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM55Q9BYV6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.7■□□□□ 0.9
TRIM55Q9BYV6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM55Q9BYV6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM55Q9BYV6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM55Q9BYV6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRIM55Q9BYV6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.69■□□□□ 0.9
TRIM55Q9BYV6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM55Q9BYV6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM55Q9BYV6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM55Q9BYV6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRIM55Q9BYV6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.69■□□□□ 0.9
TRIM55Q9BYV6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM55Q9BYV6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.69■□□□□ 0.9
TRIM55Q9BYV6 AL034346.1-201ENST00000568244 1277 ntBASIC20.69■□□□□ 0.9
TRIM55Q9BYV6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms