Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.24■□□□□ 0.35
PCGF1Q9BSM1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
PCGF1Q9BSM1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCGF1Q9BSM1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PCGF1Q9BSM1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.23■□□□□ 0.35
PCGF1Q9BSM1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCGF1Q9BSM1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCGF1Q9BSM1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCGF1Q9BSM1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCGF1Q9BSM1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCGF1Q9BSM1 SLC7A5P1-201ENST00000568957 537 ntBASIC17.23■□□□□ 0.35
PCGF1Q9BSM1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.23■□□□□ 0.35
PCGF1Q9BSM1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.23■□□□□ 0.35
PCGF1Q9BSM1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCGF1Q9BSM1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.23■□□□□ 0.35
PCGF1Q9BSM1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.23■□□□□ 0.35
PCGF1Q9BSM1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 TERF1P5-201ENST00000477545 1207 ntBASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 AL109923.1-201ENST00000618799 583 ntBASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 AC013268.1-206ENST00000638368 961 ntBASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 AC112229.1-201ENST00000639295 961 ntBASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 AC026310.3-201ENST00000625186 2373 ntBASIC17.22■□□□□ 0.35
PCGF1Q9BSM1 KRT16P2-201ENST00000414673 1423 ntBASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 GPX1P1-201ENST00000388829 606 ntBASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCGF1Q9BSM1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 NCF1B-203ENST00000435988 1254 ntBASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 CNN2P6-201ENST00000439038 900 ntBASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCGF1Q9BSM1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCGF1Q9BSM1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCGF1Q9BSM1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.19■□□□□ 0.34
PCGF1Q9BSM1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.19■□□□□ 0.34
PCGF1Q9BSM1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
PCGF1Q9BSM1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCGF1Q9BSM1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCGF1Q9BSM1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCGF1Q9BSM1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCGF1Q9BSM1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCGF1Q9BSM1 AL355802.2-201ENST00000402069 882 ntBASIC17.19■□□□□ 0.34
PCGF1Q9BSM1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms