Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SEMA3CQ99985 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
SEMA3CQ99985 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.91■□□□□ 0.94
SEMA3CQ99985 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SEMA3CQ99985 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SEMA3CQ99985 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.91■□□□□ 0.94
SEMA3CQ99985 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
SEMA3CQ99985 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.91■□□□□ 0.94
SEMA3CQ99985 CDV3P1-201ENST00000471403 739 ntBASIC20.91■□□□□ 0.94
SEMA3CQ99985 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SEMA3CQ99985 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SEMA3CQ99985 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.91■□□□□ 0.94
SEMA3CQ99985 AC068338.2-201ENST00000563278 1430 ntBASIC20.91■□□□□ 0.94
SEMA3CQ99985 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SEMA3CQ99985 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SEMA3CQ99985 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SEMA3CQ99985 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SEMA3CQ99985 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.91■□□□□ 0.94
SEMA3CQ99985 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
SEMA3CQ99985 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SEMA3CQ99985 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
SEMA3CQ99985 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3CQ99985 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3CQ99985 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3CQ99985 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3CQ99985 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3CQ99985 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SEMA3CQ99985 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3CQ99985 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.9■□□□□ 0.94
SEMA3CQ99985 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3CQ99985 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3CQ99985 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SEMA3CQ99985 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3CQ99985 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3CQ99985 HLA-L-209ENST00000420110 1011 ntBASIC20.9■□□□□ 0.94
SEMA3CQ99985 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.9■□□□□ 0.94
SEMA3CQ99985 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3CQ99985 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3CQ99985 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3CQ99985 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SEMA3CQ99985 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.9■□□□□ 0.94
SEMA3CQ99985 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.9■□□□□ 0.94
SEMA3CQ99985 AC006128.1-201ENST00000624704 1661 ntBASIC20.89■□□□□ 0.94
SEMA3CQ99985 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SEMA3CQ99985 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SEMA3CQ99985 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SEMA3CQ99985 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.89■□□□□ 0.94
SEMA3CQ99985 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SEMA3CQ99985 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.89■□□□□ 0.94
SEMA3CQ99985 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEMA3CQ99985 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEMA3CQ99985 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEMA3CQ99985 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEMA3CQ99985 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEMA3CQ99985 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SEMA3CQ99985 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.89■□□□□ 0.93
SEMA3CQ99985 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.89■□□□□ 0.93
SEMA3CQ99985 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.89■□□□□ 0.93
SEMA3CQ99985 AC016405.3-201ENST00000607710 860 ntBASIC20.89■□□□□ 0.93
SEMA3CQ99985 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.89■□□□□ 0.93
SEMA3CQ99985 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.89■□□□□ 0.93
SEMA3CQ99985 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
SEMA3CQ99985 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.89■□□□□ 0.93
SEMA3CQ99985 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SEMA3CQ99985 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.89■□□□□ 0.93
SEMA3CQ99985 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3CQ99985 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3CQ99985 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3CQ99985 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.88■□□□□ 0.93
SEMA3CQ99985 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.88■□□□□ 0.93
SEMA3CQ99985 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SEMA3CQ99985 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.88■□□□□ 0.93
SEMA3CQ99985 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.88■□□□□ 0.93
SEMA3CQ99985 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.88■□□□□ 0.93
SEMA3CQ99985 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.88■□□□□ 0.93
SEMA3CQ99985 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3CQ99985 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3CQ99985 AC026185.1-201ENST00000445748 174 ntBASIC20.88■□□□□ 0.93
SEMA3CQ99985 AL162412.1-201ENST00000567129 965 ntBASIC20.88■□□□□ 0.93
SEMA3CQ99985 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.88■□□□□ 0.93
SEMA3CQ99985 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.88■□□□□ 0.93
SEMA3CQ99985 RAP2CP1-201ENST00000605103 478 ntBASIC20.88■□□□□ 0.93
SEMA3CQ99985 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3CQ99985 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SEMA3CQ99985 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.88■□□□□ 0.93
SEMA3CQ99985 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
SEMA3CQ99985 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.87■□□□□ 0.93
SEMA3CQ99985 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEMA3CQ99985 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
SEMA3CQ99985 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEMA3CQ99985 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.87■□□□□ 0.93
SEMA3CQ99985 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEMA3CQ99985 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SEMA3CQ99985 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
SEMA3CQ99985 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEMA3CQ99985 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEMA3CQ99985 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.87■□□□□ 0.93
SEMA3CQ99985 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.87■□□□□ 0.93
SEMA3CQ99985 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SEMA3CQ99985 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms