Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 AC068338.2-201ENST00000563278 1430 ntBASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 AC069236.1-201ENST00000604339 616 ntBASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 AC061975.6-201ENST00000579045 1553 ntBASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SH3KBP1Q96B97 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3KBP1Q96B97 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SH3KBP1Q96B97 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.37■□□□□ 0.85
SH3KBP1Q96B97 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3KBP1Q96B97 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.37■□□□□ 0.85
SH3KBP1Q96B97 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SH3KBP1Q96B97 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.37■□□□□ 0.85
SH3KBP1Q96B97 AC105036.2-201ENST00000569468 176 ntBASIC20.37■□□□□ 0.85
SH3KBP1Q96B97 OR10C1-204ENST00000622521 1039 ntBASIC20.37■□□□□ 0.85
SH3KBP1Q96B97 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SH3KBP1Q96B97 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.37■□□□□ 0.85
SH3KBP1Q96B97 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SH3KBP1Q96B97 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SH3KBP1Q96B97 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 RBM17P2-201ENST00000616397 1405 ntBASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 AL162412.1-201ENST00000567129 965 ntBASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 AC142086.2-201ENST00000569753 217 ntBASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SH3KBP1Q96B97 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SH3KBP1Q96B97 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.35■□□□□ 0.85
SH3KBP1Q96B97 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3KBP1Q96B97 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3KBP1Q96B97 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3KBP1Q96B97 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.35■□□□□ 0.85
SH3KBP1Q96B97 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3KBP1Q96B97 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.35■□□□□ 0.85
SH3KBP1Q96B97 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
SH3KBP1Q96B97 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.35■□□□□ 0.85
SH3KBP1Q96B97 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SH3KBP1Q96B97 CYP2T1P-201ENST00000432607 1285 ntBASIC20.35■□□□□ 0.85
SH3KBP1Q96B97 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
SH3KBP1Q96B97 AL591742.1-201ENST00000604433 565 ntBASIC20.35■□□□□ 0.85
SH3KBP1Q96B97 Z98882.1-201ENST00000622160 2253 ntBASIC20.35■□□□□ 0.85
SH3KBP1Q96B97 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3KBP1Q96B97 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SH3KBP1Q96B97 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SH3KBP1Q96B97 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SH3KBP1Q96B97 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SH3KBP1Q96B97 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms