Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 AC097381.1-201ENST00000429019 1296 ntBASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CFAP61Q8NHU2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.77■□□□□ 0.91
CFAP61Q8NHU2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
CFAP61Q8NHU2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 TERF1P2-201ENST00000583350 1212 ntBASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 MIR6821-201ENST00000617625 74 ntBASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CFAP61Q8NHU2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CFAP61Q8NHU2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 AC026271.2-201ENST00000428091 497 ntBASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.74■□□□□ 0.91
CFAP61Q8NHU2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 DUX4L2-201ENST00000561772 1275 ntBASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 DUX4L6-201ENST00000626483 1275 ntBASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 DUX4L1-201ENST00000627662 1275 ntBASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 DUX4L8-201ENST00000629013 1275 ntBASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 DUX4L3-201ENST00000630187 1275 ntBASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 DUX4L7-201ENST00000630678 1275 ntBASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 DUX4L5-201ENST00000630834 1275 ntBASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CFAP61Q8NHU2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms