Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 AC137767.1-201ENST00000602918 1920 ntBASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 NUDT16P1-203ENST00000513809 620 ntBASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC168Q8NDH2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 RBM17P1-201ENST00000453646 1190 ntBASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 AC073195.1-201ENST00000607241 877 ntBASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CCDC168Q8NDH2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 AC105020.6-201ENST00000621523 1217 ntBASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 AL358472.4-201ENST00000633140 710 ntBASIC17.37■□□□□ 0.37
CCDC168Q8NDH2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 AC091799.1-201ENST00000422823 811 ntBASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 SLC25A3P1-201ENST00000443844 931 ntBASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 AL031963.3-201ENST00000606441 850 ntBASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 AC087633.2-202ENST00000565166 1439 ntBASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 ANOS2P-203ENST00000472227 1816 ntBASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 CRYGFP-201ENST00000418459 633 ntBASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 AL390955.1-201ENST00000428694 934 ntBASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CCDC168Q8NDH2 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
CCDC168Q8NDH2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC168Q8NDH2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC168Q8NDH2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.35■□□□□ 0.37
CCDC168Q8NDH2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC168Q8NDH2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC168Q8NDH2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC168Q8NDH2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC168Q8NDH2 AC003102.1-202ENST00000563394 1796 ntBASIC17.35■□□□□ 0.37
CCDC168Q8NDH2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC168Q8NDH2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CCDC168Q8NDH2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.35■□□□□ 0.37
CCDC168Q8NDH2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
CCDC168Q8NDH2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms