Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 ANKZF1-203ENST00000410034 2486 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.253e-7■■□□□ 12
PABPN1Q86U42 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.143e-7■■□□□ 12
PABPN1Q86U42 ANKZF1-218ENST00000477479 2940 ntTSL 1 (best)21.08■□□□□ 0.973e-7■■□□□ 12
PABPN1Q86U42 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC19.83■□□□□ 0.773e-7■■□□□ 12
PABPN1Q86U42 ANKZF1-211ENST00000463792 3245 ntTSL 219.74■□□□□ 0.753e-7■■□□□ 12
PABPN1Q86U42 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC56.26■■■■■ 6.66e-6■■□□□ 12
PABPN1Q86U42 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC47.83■■■■■ 5.256e-6■■□□□ 12
PABPN1Q86U42 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC44.01■■■■■ 4.646e-6■■□□□ 12
PABPN1Q86U42 BUD23-206ENST00000430270 1260 ntTSL 540.34■■■■■ 4.056e-6■■□□□ 12
PABPN1Q86U42 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC38.73■■■■□ 3.796e-6■■□□□ 12
PABPN1Q86U42 ZFAND2B-219ENST00000486734 889 ntTSL 336.98■■■■□ 3.516e-6■■□□□ 12
PABPN1Q86U42 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.486e-6■■□□□ 12
PABPN1Q86U42 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.466e-7■■□□□ 12
PABPN1Q86U42 FOXK2-202ENST00000473637 3462 ntTSL 1 (best)33.55■■■□□ 2.966e-6■■□□□ 12
PABPN1Q86U42 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC32.7■■■□□ 2.836e-6■■□□□ 12
PABPN1Q86U42 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC30.81■■■□□ 2.526e-7■■□□□ 12
PABPN1Q86U42 CDK18-213ENST00000504648 2435 ntTSL 230.49■■■□□ 2.476e-7■■□□□ 12
PABPN1Q86U42 LINC00969-313ENST00000628917 490 ntTSL 530.27■■■□□ 2.442e-7■■□□□ 12
PABPN1Q86U42 LINC00969-244ENST00000602127 749 ntTSL 530.27■■■□□ 2.442e-7■■□□□ 12
PABPN1Q86U42 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC30.27■■■□□ 2.442e-7■■□□□ 12
PABPN1Q86U42 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC30■■■□□ 2.396e-6■■□□□ 12
PABPN1Q86U42 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.376e-6■■□□□ 12
PABPN1Q86U42 SH2B1-213ENST00000568868 342 ntTSL 229.12■■■□□ 2.256e-6■■□□□ 12
PABPN1Q86U42 ZFAND2B-213ENST00000448496 1064 ntTSL 328.92■■■□□ 2.226e-6■■□□□ 12
PABPN1Q86U42 SH2B1-214ENST00000569471 791 ntTSL 328.19■■■□□ 2.16e-6■■□□□ 12
PABPN1Q86U42 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC28.14■■■□□ 2.096e-6■■□□□ 12
PABPN1Q86U42 CDK18-210ENST00000484080 1040 ntTSL 228.06■■■□□ 2.086e-7■■□□□ 12
PABPN1Q86U42 LINC00969-217ENST00000451982 1161 ntTSL 527.91■■■□□ 2.062e-7■■□□□ 12
PABPN1Q86U42 FOXK2-205ENST00000529652 2199 ntTSL 227.18■■□□□ 1.946e-6■■□□□ 12
PABPN1Q86U42 CNDP2-229ENST00000585263 2566 nt27■■□□□ 1.916e-6■■□□□ 12
PABPN1Q86U42 BUD23-212ENST00000453316 452 ntTSL 326.78■■□□□ 1.886e-6■■□□□ 12
PABPN1Q86U42 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC26.71■■□□□ 1.876e-6■■□□□ 12
PABPN1Q86U42 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC26.49■■□□□ 1.832e-7■■□□□ 12
PABPN1Q86U42 BUD23-211ENST00000442099 691 ntTSL 326.21■■□□□ 1.796e-6■■□□□ 12
PABPN1Q86U42 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC25.98■■□□□ 1.752e-7■■□□□ 12
PABPN1Q86U42 BUD23-207ENST00000430446 738 ntTSL 325.96■■□□□ 1.756e-6■■□□□ 12
PABPN1Q86U42 BUD23-213ENST00000463307 1815 ntTSL 1 (best)25.67■■□□□ 1.76e-6■■□□□ 12
PABPN1Q86U42 CDK18-223ENST00000515514 541 ntTSL 425.49■■□□□ 1.676e-7■■□□□ 12
PABPN1Q86U42 LINC00969-285ENST00000627152 846 ntTSL 525.34■■□□□ 1.652e-7■■□□□ 12
PABPN1Q86U42 ZFAND2B-209ENST00000422255 705 ntTSL 324.81■■□□□ 1.566e-6■■□□□ 12
PABPN1Q86U42 LINC00969-236ENST00000599448 780 ntTSL 524.64■■□□□ 1.542e-7■■□□□ 12
PABPN1Q86U42 LINC00969-342ENST00000631366 751 ntTSL 524.64■■□□□ 1.542e-7■■□□□ 12
PABPN1Q86U42 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC24.57■■□□□ 1.522e-7■■□□□ 12
PABPN1Q86U42 LINC00969-331ENST00000630863 954 ntTSL 524.11■■□□□ 1.452e-7■■□□□ 12
PABPN1Q86U42 LINC00969-247ENST00000608737 956 ntTSL 5 BASIC24.04■■□□□ 1.442e-7■■□□□ 12
PABPN1Q86U42 LINC00969-296ENST00000627718 510 ntTSL 523.86■■□□□ 1.412e-7■■□□□ 12
PABPN1Q86U42 LINC00969-204ENST00000420851 868 ntTSL 5 BASIC23.86■■□□□ 1.412e-7■■□□□ 12
PABPN1Q86U42 LINC00969-263ENST00000626007 839 ntTSL 5 BASIC23.84■■□□□ 1.412e-7■■□□□ 12
PABPN1Q86U42 LINC00969-320ENST00000629823 869 ntTSL 523.82■■□□□ 1.42e-7■■□□□ 12
PABPN1Q86U42 CDK18-220ENST00000512008 582 ntTSL 423.49■■□□□ 1.356e-7■■□□□ 12
PABPN1Q86U42 LINC00969-336ENST00000631189 1156 ntTSL 522.85■■□□□ 1.252e-7■■□□□ 12
PABPN1Q86U42 BUD23-209ENST00000436944 2496 ntTSL 222.45■■□□□ 1.186e-6■■□□□ 12
PABPN1Q86U42 LINC00969-225ENST00000594715 729 ntTSL 522■■□□□ 1.112e-7■■□□□ 12
PABPN1Q86U42 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC21.54■■□□□ 1.046e-6■■□□□ 12
PABPN1Q86U42 LINC00969-272ENST00000626569 857 ntTSL 5 BASIC20.94■□□□□ 0.942e-7■■□□□ 12
PABPN1Q86U42 LINC00969-216ENST00000451228 604 ntTSL 320.93■□□□□ 0.942e-7■■□□□ 12
PABPN1Q86U42 LINC00969-281ENST00000626969 745 ntTSL 520.12■□□□□ 0.812e-7■■□□□ 12
PABPN1Q86U42 LINC00969-274ENST00000626617 1014 ntTSL 519.98■□□□□ 0.792e-7■■□□□ 12
PABPN1Q86U42 LINC00969-230ENST00000597034 731 ntTSL 519.78■□□□□ 0.762e-7■■□□□ 12
PABPN1Q86U42 LINC00969-259ENST00000625776 911 ntTSL 519.37■□□□□ 0.692e-7■■□□□ 12
PABPN1Q86U42 LINC00969-327ENST00000630417 918 ntTSL 519.23■□□□□ 0.672e-7■■□□□ 12
PABPN1Q86U42 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC19.04■□□□□ 0.642e-7■■□□□ 12
PABPN1Q86U42 CELSR3-204ENST00000498057 5297 ntTSL 219.01■□□□□ 0.636e-6■■□□□ 12
PABPN1Q86U42 ZFAND2B-216ENST00000469596 532 ntTSL 518.88■□□□□ 0.616e-6■■□□□ 12
PABPN1Q86U42 FOXK2-212ENST00000624186 4244 nt18.21■□□□□ 0.516e-6■■□□□ 12
PABPN1Q86U42 LINC00969-293ENST00000627562 1184 ntTSL 517.68■□□□□ 0.422e-7■■□□□ 12
PABPN1Q86U42 PCMTD2-203ENST00000308824 3843 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.346e-6■■□□□ 12
PABPN1Q86U42 LINC00969-208ENST00000431767 486 ntTSL 517.14■□□□□ 0.332e-7■■□□□ 12
PABPN1Q86U42 LINC00969-335ENST00000631105 702 ntTSL 516.74■□□□□ 0.272e-7■■□□□ 12
PABPN1Q86U42 LINC00969-308ENST00000628547 882 ntTSL 516.51■□□□□ 0.232e-7■■□□□ 12
PABPN1Q86U42 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.236e-6■■□□□ 12
PABPN1Q86U42 CELSR3-202ENST00000461362 3633 ntTSL 516.1■□□□□ 0.176e-6■■□□□ 12
PABPN1Q86U42 LINC00969-324ENST00000630243 955 ntTSL 515.9■□□□□ 0.142e-7■■□□□ 12
PABPN1Q86U42 LINC00969-290ENST00000627502 874 ntTSL 515.88■□□□□ 0.132e-7■■□□□ 12
PABPN1Q86U42 BUD23-215ENST00000471215 3886 ntTSL 215.58■□□□□ 0.086e-6■■□□□ 12
PABPN1Q86U42 LINC00969-304ENST00000628301 772 ntTSL 515.18■□□□□ 0.022e-7■■□□□ 12
PABPN1Q86U42 LINC00969-288ENST00000627363 731 ntTSL 514.89□□□□□ -0.032e-7■■□□□ 12
PABPN1Q86U42 LINC00969-317ENST00000629686 669 ntTSL 514.8□□□□□ -0.042e-7■■□□□ 12
PABPN1Q86U42 LINC00969-252ENST00000620737 702 ntTSL 514.8□□□□□ -0.042e-7■■□□□ 12
PABPN1Q86U42 LINC00969-215ENST00000451216 405 ntTSL 514.74□□□□□ -0.052e-7■■□□□ 12
PABPN1Q86U42 LINC00969-267ENST00000626178 342 ntTSL 512.44□□□□□ -0.422e-7■■□□□ 12
PABPN1Q86U42 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC11.1□□□□□ -0.632e-7■■□□□ 12
PABPN1Q86U42 LINC00969-251ENST00000618708 606 ntTSL 59.65□□□□□ -0.862e-7■■□□□ 12
PABPN1Q86U42 DDX39B-216ENST00000462421 618 ntTSL 317.63■□□□□ 0.414e-19■■□□□ 12
PABPN1Q86U42 MAPK8IP3-210ENST00000566589 873 ntTSL 532.72■■■□□ 2.834e-8■■□□□ 12
PABPN1Q86U42 CCNL2-217ENST00000492998 745 ntTSL 334.39■■■■□ 3.11e-14■■□□□ 12
PABPN1Q86U42 CLASRP-210ENST00000588070 445 ntTSL 230.68■■■□□ 2.51e-6■■□□□ 12
PABPN1Q86U42 CLASRP-216ENST00000592876 751 ntTSL 325.23■■□□□ 1.631e-6■■□□□ 12
PABPN1Q86U42 NARF-205ENST00000412079 1760 ntTSL 5 BASIC38.34■■■■□ 3.733e-7■■□□□ 11.9
PABPN1Q86U42 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC38■■■■□ 3.673e-7■■□□□ 11.9
PABPN1Q86U42 NARF-204ENST00000390006 1766 ntTSL 2 BASIC34.23■■■■□ 3.073e-7■■□□□ 11.9
PABPN1Q86U42 NARF-203ENST00000374611 1722 ntTSL 532.16■■■□□ 2.743e-7■■□□□ 11.9
PABPN1Q86U42 NARF-206ENST00000457415 1668 ntTSL 5 BASIC31.9■■■□□ 2.73e-7■■□□□ 11.9
PABPN1Q86U42 NARF-220ENST00000582907 1454 ntTSL 528.42■■■□□ 2.143e-7■■□□□ 11.9
PABPN1Q86U42 NARF-211ENST00000578820 625 ntTSL 323.5■■□□□ 1.353e-7■■□□□ 11.9
PABPN1Q86U42 NARF-226ENST00000584513 500 ntTSL 320.88■□□□□ 0.933e-7■■□□□ 11.9
PABPN1Q86U42 NARF-201ENST00000309794 3949 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.873e-7■■□□□ 11.9
PABPN1Q86U42 NARF-225ENST00000584445 2484 ntTSL 219.64■□□□□ 0.733e-7■■□□□ 11.9
PABPN1Q86U42 NARF-222ENST00000583908 430 ntTSL 319.23■□□□□ 0.673e-7■■□□□ 11.9
PABPN1Q86U42 NARF-209ENST00000577812 2598 ntTSL 518.45■□□□□ 0.543e-7■■□□□ 11.9
Retrieved 100 of 8,254 protein–RNA pairs in 64.3 ms