Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RC3H1Q5TC82 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
RC3H1Q5TC82 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC26.26■■□□□ 1.79
RC3H1Q5TC82 KRT18P21-201ENST00000515767 1272 ntBASIC26.26■■□□□ 1.79
RC3H1Q5TC82 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RC3H1Q5TC82 MIR4785-201ENST00000585005 73 ntBASIC26.26■■□□□ 1.79
RC3H1Q5TC82 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.26■■□□□ 1.79
RC3H1Q5TC82 AC113410.3-201ENST00000623366 203 ntBASIC26.26■■□□□ 1.79
RC3H1Q5TC82 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
RC3H1Q5TC82 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 TSPY15P-201ENST00000457163 923 ntBASIC26.25■■□□□ 1.79
RC3H1Q5TC82 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 AC012306.2-201ENST00000609350 630 ntBASIC26.25■■□□□ 1.79
RC3H1Q5TC82 AC097493.4-201ENST00000641197 219 ntBASIC26.25■■□□□ 1.79
RC3H1Q5TC82 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 FAM99A-202ENST00000538190 1989 ntBASIC26.25■■□□□ 1.79
RC3H1Q5TC82 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
RC3H1Q5TC82 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RC3H1Q5TC82 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC26.24■■□□□ 1.79
RC3H1Q5TC82 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
RC3H1Q5TC82 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
RC3H1Q5TC82 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC26.24■■□□□ 1.79
RC3H1Q5TC82 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RC3H1Q5TC82 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC26.24■■□□□ 1.79
RC3H1Q5TC82 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC26.24■■□□□ 1.79
RC3H1Q5TC82 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC26.24■■□□□ 1.79
RC3H1Q5TC82 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC26.24■■□□□ 1.79
RC3H1Q5TC82 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC26.24■■□□□ 1.79
RC3H1Q5TC82 RARRES2P10-201ENST00000564312 460 ntBASIC26.24■■□□□ 1.79
RC3H1Q5TC82 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
RC3H1Q5TC82 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
RC3H1Q5TC82 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC26.24■■□□□ 1.79
RC3H1Q5TC82 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
RC3H1Q5TC82 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RC3H1Q5TC82 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
RC3H1Q5TC82 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC26.23■■□□□ 1.79
RC3H1Q5TC82 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RC3H1Q5TC82 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RC3H1Q5TC82 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
RC3H1Q5TC82 AC087499.1-201ENST00000418141 1075 ntBASIC26.23■■□□□ 1.79
RC3H1Q5TC82 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RC3H1Q5TC82 MAX-217ENST00000557277 728 ntTSL 3 BASIC26.23■■□□□ 1.79
RC3H1Q5TC82 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RC3H1Q5TC82 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC26.23■■□□□ 1.79
RC3H1Q5TC82 SNX21-213ENST00000614929 587 ntTSL 5 BASIC26.23■■□□□ 1.79
RC3H1Q5TC82 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RC3H1Q5TC82 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RC3H1Q5TC82 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RC3H1Q5TC82 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
RC3H1Q5TC82 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
RC3H1Q5TC82 KRASP1-201ENST00000407852 552 ntBASIC26.22■■□□□ 1.79
RC3H1Q5TC82 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RC3H1Q5TC82 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC26.22■■□□□ 1.79
RC3H1Q5TC82 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RC3H1Q5TC82 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC26.22■■□□□ 1.79
RC3H1Q5TC82 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC26.22■■□□□ 1.79
RC3H1Q5TC82 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC26.22■■□□□ 1.79
RC3H1Q5TC82 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RC3H1Q5TC82 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC26.22■■□□□ 1.79
RC3H1Q5TC82 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC26.22■■□□□ 1.79
RC3H1Q5TC82 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RC3H1Q5TC82 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC26.21■■□□□ 1.79
RC3H1Q5TC82 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC26.21■■□□□ 1.79
RC3H1Q5TC82 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC26.21■■□□□ 1.79
RC3H1Q5TC82 AC006557.6-201ENST00000623071 864 ntBASIC26.21■■□□□ 1.79
RC3H1Q5TC82 AC133561.5-201ENST00000635547 218 ntBASIC26.21■■□□□ 1.79
RC3H1Q5TC82 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RC3H1Q5TC82 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.21■■□□□ 1.79
RC3H1Q5TC82 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RC3H1Q5TC82 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
RC3H1Q5TC82 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
RC3H1Q5TC82 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RC3H1Q5TC82 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC26.2■■□□□ 1.78
RC3H1Q5TC82 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RC3H1Q5TC82 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RC3H1Q5TC82 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.2■■□□□ 1.78
RC3H1Q5TC82 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC26.2■■□□□ 1.78
RC3H1Q5TC82 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RC3H1Q5TC82 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RC3H1Q5TC82 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC26.2■■□□□ 1.78
RC3H1Q5TC82 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RC3H1Q5TC82 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
RC3H1Q5TC82 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
RC3H1Q5TC82 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RC3H1Q5TC82 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms