Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.04■□□□□ 0.8
PDX1P52945 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.04■□□□□ 0.8
PDX1P52945 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.04■□□□□ 0.8
PDX1P52945 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDX1P52945 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PDX1P52945 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDX1P52945 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDX1P52945 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDX1P52945 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDX1P52945 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDX1P52945 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDX1P52945 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.03■□□□□ 0.8
PDX1P52945 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDX1P52945 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.03■□□□□ 0.8
PDX1P52945 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDX1P52945 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDX1P52945 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDX1P52945 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.03■□□□□ 0.8
PDX1P52945 LSM12P1-201ENST00000411836 588 ntBASIC20.03■□□□□ 0.8
PDX1P52945 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.03■□□□□ 0.8
PDX1P52945 AL158047.1-201ENST00000445918 881 ntBASIC20.03■□□□□ 0.8
PDX1P52945 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDX1P52945 AP003097.1-201ENST00000530657 1135 ntBASIC20.03■□□□□ 0.8
PDX1P52945 FAM21FP-204ENST00000608637 956 ntBASIC20.03■□□□□ 0.8
PDX1P52945 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDX1P52945 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDX1P52945 AC026471.6-201ENST00000622954 1905 ntBASIC20.03■□□□□ 0.8
PDX1P52945 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
PDX1P52945 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDX1P52945 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
PDX1P52945 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDX1P52945 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDX1P52945 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.02■□□□□ 0.8
PDX1P52945 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.02■□□□□ 0.8
PDX1P52945 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
PDX1P52945 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDX1P52945 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDX1P52945 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDX1P52945 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDX1P52945 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDX1P52945 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDX1P52945 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDX1P52945 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDX1P52945 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.02■□□□□ 0.8
PDX1P52945 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PDX1P52945 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.02■□□□□ 0.8
PDX1P52945 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.02■□□□□ 0.8
PDX1P52945 AC073648.6-201ENST00000641589 218 ntBASIC20.02■□□□□ 0.8
PDX1P52945 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
PDX1P52945 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PDX1P52945 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PDX1P52945 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDX1P52945 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PDX1P52945 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.02■□□□□ 0.79
PDX1P52945 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.01■□□□□ 0.79
PDX1P52945 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDX1P52945 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDX1P52945 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.01■□□□□ 0.79
PDX1P52945 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDX1P52945 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDX1P52945 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDX1P52945 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDX1P52945 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDX1P52945 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.01■□□□□ 0.79
PDX1P52945 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.01■□□□□ 0.79
PDX1P52945 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.01■□□□□ 0.79
PDX1P52945 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.01■□□□□ 0.79
PDX1P52945 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PDX1P52945 AC142381.4-202ENST00000563973 229 ntBASIC20.01■□□□□ 0.79
PDX1P52945 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.01■□□□□ 0.79
PDX1P52945 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDX1P52945 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
PDX1P52945 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.01■□□□□ 0.79
PDX1P52945 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDX1P52945 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDX1P52945 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDX1P52945 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PDX1P52945 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PDX1P52945 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDX1P52945 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PDX1P52945 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDX1P52945 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20■□□□□ 0.79
PDX1P52945 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDX1P52945 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
PDX1P52945 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20■□□□□ 0.79
PDX1P52945 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PDX1P52945 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20■□□□□ 0.79
PDX1P52945 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20■□□□□ 0.79
PDX1P52945 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20■□□□□ 0.79
PDX1P52945 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20■□□□□ 0.79
PDX1P52945 CYP2T3P-201ENST00000601990 817 ntBASIC20■□□□□ 0.79
PDX1P52945 AP006294.2-201ENST00000641667 209 ntBASIC20■□□□□ 0.79
PDX1P52945 AC007375.3-201ENST00000600936 2314 ntBASIC20■□□□□ 0.79
PDX1P52945 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
PDX1P52945 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDX1P52945 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
PDX1P52945 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDX1P52945 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDX1P52945 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.99■□□□□ 0.79
PDX1P52945 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms