Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 ANAPC5-218ENST00000541887 2400 ntTSL 5 BASIC7.89□□□□□ -1.154e-15■■■□□ 17.6
NCBP2P52298 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.133e-7■■■□□ 17.6
NCBP2P52298 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.161e-9■■■□□ 17.6
NCBP2P52298 RIF1-202ENST00000414861 2534 ntTSL 1 (best)9.1□□□□□ -0.952e-10■■■□□ 17.6
NCBP2P52298 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.152e-10■■■□□ 17.6
NCBP2P52298 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.22e-10■■■□□ 17.6
NCBP2P52298 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.242e-10■■■□□ 17.6
NCBP2P52298 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.311e-9■■■□□ 17.6
NCBP2P52298 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.672e-10■■■□□ 17.6
NCBP2P52298 TRIR-204ENST00000591254 988 ntTSL 223.3■■□□□ 1.321e-15■■■□□ 17.6
NCBP2P52298 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.02■□□□□ 0.961e-15■■■□□ 17.6
NCBP2P52298 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.74■□□□□ 0.911e-15■■■□□ 17.6
NCBP2P52298 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.851e-15■■■□□ 17.6
NCBP2P52298 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.832e-8■■■□□ 17.6
NCBP2P52298 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.822e-8■■■□□ 17.6
NCBP2P52298 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.44■□□□□ 0.222e-8■■■□□ 17.6
NCBP2P52298 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.47■□□□□ 0.072e-8■■■□□ 17.6
NCBP2P52298 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.38□□□□□ -0.112e-8■■■□□ 17.6
NCBP2P52298 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.172e-8■■■□□ 17.6
NCBP2P52298 NDUFB7-202ENST00000593353 529 ntTSL 213.96□□□□□ -0.172e-8■■■□□ 17.6
NCBP2P52298 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.67□□□□□ -0.382e-8■■■□□ 17.6
NCBP2P52298 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.482e-6■■■□□ 17.6
NCBP2P52298 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.046e-7■■■□□ 17.6
NCBP2P52298 PTTG1IP-206ENST00000480234 398 ntTSL 318.3■□□□□ 0.522e-12■■■□□ 17.6
NCBP2P52298 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.58■□□□□ 0.42e-12■■■□□ 17.6
NCBP2P52298 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.48■□□□□ 0.392e-12■■■□□ 17.6
NCBP2P52298 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.32e-12■■■□□ 17.6
NCBP2P52298 WDR75-203ENST00000436347 2703 ntTSL 28.07□□□□□ -1.121e-14■■■□□ 17.5
NCBP2P52298 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.151e-14■■■□□ 17.5
NCBP2P52298 WDR75-205ENST00000475596 552 ntTSL 27.64□□□□□ -1.191e-14■■■□□ 17.5
NCBP2P52298 WDR75-204ENST00000472286 706 ntTSL 27.05□□□□□ -1.281e-14■■■□□ 17.5
NCBP2P52298 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.42□□□□□ -1.71e-14■■■□□ 17.5
NCBP2P52298 WDR75-202ENST00000427960 4297 ntTSL 1 (best)3.7□□□□□ -1.821e-14■■■□□ 17.5
NCBP2P52298 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.092e-8■■■□□ 17.5
NCBP2P52298 EME2-206ENST00000570069 5613 ntTSL 217.06■□□□□ 0.322e-8■■■□□ 17.5
NCBP2P52298 TANK-221ENST00000483622 566 ntTSL 57.96□□□□□ -1.143e-17■■■□□ 17.5
NCBP2P52298 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.92□□□□□ -1.783e-17■■■□□ 17.5
NCBP2P52298 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.212e-8■■■□□ 17.5
NCBP2P52298 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.85■□□□□ 0.132e-8■■■□□ 17.5
NCBP2P52298 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.83□□□□□ -0.042e-8■■■□□ 17.5
NCBP2P52298 TRIP10-212ENST00000600677 2022 ntTSL 514.53□□□□□ -0.082e-8■■■□□ 17.5
NCBP2P52298 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.99□□□□□ -0.172e-8■■■□□ 17.5
NCBP2P52298 TRIP10-206ENST00000596543 545 ntTSL 413.86□□□□□ -0.192e-8■■■□□ 17.5
NCBP2P52298 TRIP10-203ENST00000595305 2068 ntTSL 213.83□□□□□ -0.22e-8■■■□□ 17.5
NCBP2P52298 AC254633.1-201ENST00000606790 345 ntBASIC10.59□□□□□ -0.713e-9■■■□□ 17.4
NCBP2P52298 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.21■□□□□ 0.033e-45■■■□□ 17.4
NCBP2P52298 PDS5B-207ENST00000482955 581 ntTSL 318.95■□□□□ 0.621e-10■■■□□ 17.4
NCBP2P52298 PDS5B-208ENST00000493653 972 ntTSL 1 (best)10.7□□□□□ -0.71e-10■■■□□ 17.4
NCBP2P52298 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.641e-10■■■□□ 17.4
NCBP2P52298 PDS5B-209ENST00000498550 4238 ntTSL 1 (best)2.92□□□□□ -1.941e-10■■■□□ 17.4
NCBP2P52298 PDS5B-204ENST00000466078 1889 ntTSL 22.62□□□□□ -1.991e-10■■■□□ 17.4
NCBP2P52298 PDS5B-203ENST00000450460 5246 ntTSL 1 (best)1.64□□□□□ -2.151e-10■■■□□ 17.4
NCBP2P52298 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.96■■□□□ 1.276e-9■■■□□ 17.4
NCBP2P52298 PPM1B-203ENST00000378540 1703 ntTSL 221.9■■□□□ 1.16e-9■■■□□ 17.4
NCBP2P52298 PPM1B-208ENST00000419807 2084 ntTSL 520.77■□□□□ 0.926e-9■■■□□ 17.4
NCBP2P52298 RPL14-204ENST00000435633 966 ntTSL 219.53■□□□□ 0.726e-9■■■□□ 17.4
NCBP2P52298 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.486e-9■■■□□ 17.4
NCBP2P52298 PPM1B-207ENST00000409486 1481 ntTSL 1 (best)17.7■□□□□ 0.426e-9■■■□□ 17.4
NCBP2P52298 SEPT10-213ENST00000486678 980 ntTSL 517.12■□□□□ 0.336e-9■■■□□ 17.4
NCBP2P52298 SEPT10-210ENST00000461295 581 ntTSL 316.99■□□□□ 0.316e-9■■■□□ 17.4
NCBP2P52298 SEPT10-206ENST00000423520 557 ntTSL 416.99■□□□□ 0.316e-9■■■□□ 17.4
NCBP2P52298 SEPT10-214ENST00000493445 583 ntTSL 516.81■□□□□ 0.286e-9■■■□□ 17.4
NCBP2P52298 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.046e-9■■■□□ 17.4
NCBP2P52298 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.146e-9■■■□□ 17.4
NCBP2P52298 SEPT10-207ENST00000425498 566 ntTSL 413.72□□□□□ -0.216e-9■■■□□ 17.4
NCBP2P52298 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.236e-9■■■□□ 17.4
NCBP2P52298 SEPT10-208ENST00000437928 1782 ntTSL 5 BASIC12.07□□□□□ -0.486e-9■■■□□ 17.4
NCBP2P52298 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC11.73□□□□□ -0.536e-9■■■□□ 17.4
NCBP2P52298 SEPT10-201ENST00000356688 3091 ntTSL 2 BASIC11.54□□□□□ -0.566e-9■■■□□ 17.4
NCBP2P52298 SEPT10-203ENST00000397714 2719 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.636e-9■■■□□ 17.4
NCBP2P52298 RPL14-203ENST00000416518 812 ntTSL 3 BASIC11.06□□□□□ -0.646e-9■■■□□ 17.4
NCBP2P52298 SEPT10-205ENST00000415095 1605 ntTSL 5 BASIC8.26□□□□□ -1.096e-9■■■□□ 17.4
NCBP2P52298 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.256e-9■■■□□ 17.4
NCBP2P52298 RPL14-207ENST00000465325 788 ntTSL 35.8□□□□□ -1.486e-9■■■□□ 17.4
NCBP2P52298 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.97□□□□□ -0.012e-8■■■□□ 17.4
NCBP2P52298 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC8.99□□□□□ -0.972e-8■■■□□ 17.4
NCBP2P52298 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.162e-8■■■□□ 17.4
NCBP2P52298 URI1-206ENST00000574110 2495 ntTSL 1 (best)23.01■■□□□ 1.275e-7■■■□□ 17.4
NCBP2P52298 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.355e-7■■■□□ 17.4
NCBP2P52298 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.575e-7■■■□□ 17.4
NCBP2P52298 URI1-208ENST00000574233 486 ntTSL 33.58□□□□□ -1.845e-7■■■□□ 17.4
NCBP2P52298 URI1-203ENST00000570564 514 ntTSL 43.51□□□□□ -1.855e-7■■■□□ 17.4
NCBP2P52298 LINC00511-214ENST00000581801 379 ntTSL 39.99□□□□□ -0.812e-6■■■□□ 17.4
NCBP2P52298 USP48-214ENST00000532737 680 ntTSL 423.03■■□□□ 1.282e-8■■■□□ 17.4
NCBP2P52298 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.87■□□□□ 0.772e-8■■■□□ 17.4
NCBP2P52298 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.572e-8■■■□□ 17.4
NCBP2P52298 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.86■□□□□ 0.452e-8■■■□□ 17.4
NCBP2P52298 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.12■□□□□ 0.335e-9■■■□□ 17.4
NCBP2P52298 TRNAU1AP-209ENST00000495995 2040 ntTSL 216.69■□□□□ 0.265e-9■■■□□ 17.4
NCBP2P52298 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.195e-9■■■□□ 17.4
NCBP2P52298 TRNAU1AP-205ENST00000480930 1132 ntTSL 1 (best)14.13□□□□□ -0.155e-9■■■□□ 17.4
NCBP2P52298 TRNAU1AP-207ENST00000491577 1610 ntTSL 213.66□□□□□ -0.225e-9■■■□□ 17.4
NCBP2P52298 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.235e-9■■■□□ 17.4
NCBP2P52298 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.375e-9■■■□□ 17.4
NCBP2P52298 TFCP2-203ENST00000548108 1508 ntTSL 1 (best)11.86□□□□□ -0.515e-9■■■□□ 17.4
NCBP2P52298 TRNAU1AP-202ENST00000411406 450 ntTSL 28.37□□□□□ -1.075e-9■■■□□ 17.4
NCBP2P52298 TRNAU1AP-204ENST00000464880 609 ntTSL 33.02□□□□□ -1.935e-9■■■□□ 17.4
NCBP2P52298 BCAR1-214ENST00000563700 576 ntTSL 413.44□□□□□ -0.261e-7■■■□□ 17.3
NCBP2P52298 AC009078.3-201ENST00000624205 4084 ntBASIC10.31□□□□□ -0.761e-7■■■□□ 17.3
NCBP2P52298 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.614e-7■■■□□ 17.3
Retrieved 100 of 18,329 protein–RNA pairs in 244.1 ms