Protein–RNA interactions for Protein: P46962

CTK2, CTD kinase subunit beta, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK2P46962 YPR014CYPR014C 330 nt2.85□□□□□ -1.95
CTK2P46962 YPR170W-AYPR170W-A 186 nt2.85□□□□□ -1.95
CTK2P46962 snR191snR191 274 nt2.85□□□□□ -1.95
CTK2P46962 CHA4YLR098C 1947 nt2.85□□□□□ -1.95
CTK2P46962 MIT1YEL007W 2001 nt2.85□□□□□ -1.95
CTK2P46962 FLO9YAL063C 3969 nt2.85□□□□□ -1.95
CTK2P46962 BUD4YJR092W 4344 nt2.84□□□□□ -1.95
CTK2P46962 AKR1YDR264C 2295 nt2.84□□□□□ -1.95
CTK2P46962 DSE4YNR067C 3354 nt2.84□□□□□ -1.95
CTK2P46962 YER038W-AYER038W-A 381 nt2.84□□□□□ -1.95
CTK2P46962 ERG28YER044C 447 nt2.84□□□□□ -1.95
CTK2P46962 YER107W-AYER107W-A 321 nt2.84□□□□□ -1.95
CTK2P46962 tR(ACG)Q2tR(ACG)Q2 74 nt2.84□□□□□ -1.95
CTK2P46962 BAT1YHR208W 1182 nt2.84□□□□□ -1.95
CTK2P46962 MRP49YKL167C 414 nt2.84□□□□□ -1.95
CTK2P46962 RPS21AYKR057W 264 nt2.84□□□□□ -1.95
CTK2P46962 YLR406C-AYLR406C-A 150 nt2.84□□□□□ -1.95
CTK2P46962 YML108WYML108W 318 nt2.84□□□□□ -1.95
CTK2P46962 YMR153C-AYMR153C-A 336 nt2.84□□□□□ -1.95
CTK2P46962 NOP15YNL110C 663 nt2.84□□□□□ -1.95
CTK2P46962 IRC16YPR038W 360 nt2.84□□□□□ -1.95
CTK2P46962 PAM1YDR251W 2493 nt2.84□□□□□ -1.96
CTK2P46962 YKR078WYKR078W 1758 nt2.84□□□□□ -1.96
CTK2P46962 BFR1YOR198C 1413 nt2.84□□□□□ -1.96
CTK2P46962 GCN1YGL195W 8019 nt2.84□□□□□ -1.96
CTK2P46962 YAK1YJL141C 2424 nt2.83□□□□□ -1.96
CTK2P46962 TRZ1YKR079C 2517 nt2.83□□□□□ -1.96
CTK2P46962 YOL057WYOL057W 2136 nt2.83□□□□□ -1.96
CTK2P46962 HUR1YGL168W 333 nt2.83□□□□□ -1.96
CTK2P46962 ERV1YGR029W 570 nt2.83□□□□□ -1.96
CTK2P46962 RTS3YGR161C 792 nt2.83□□□□□ -1.96
CTK2P46962 TCD1YHR003C 1290 nt2.83□□□□□ -1.96
CTK2P46962 YHR028W-AYHR028W-A 321 nt2.83□□□□□ -1.96
CTK2P46962 LSM2YBL026W 288 nt2.83□□□□□ -1.96
CTK2P46962 PKR1YMR123W 369 nt2.83□□□□□ -1.96
CTK2P46962 YNL046WYNL046W 519 nt2.83□□□□□ -1.96
CTK2P46962 CAT5YOR125C 702 nt2.83□□□□□ -1.96
CTK2P46962 ALG14YBR070C 714 nt2.83□□□□□ -1.96
CTK2P46962 MAK21YDR060W 3078 nt2.82□□□□□ -1.96
CTK2P46962 PPN1YDR452W 2025 nt2.82□□□□□ -1.96
CTK2P46962 YCR081C-AYCR081C-A 237 nt2.82□□□□□ -1.96
CTK2P46962 PPH3YDR075W 927 nt2.82□□□□□ -1.96
CTK2P46962 RMT2YDR465C 1239 nt2.82□□□□□ -1.96
CTK2P46962 RPL30YGL030W 318 nt2.82□□□□□ -1.96
CTK2P46962 USE1YGL098W 738 nt2.82□□□□□ -1.96
CTK2P46962 YLR230WYLR230W 306 nt2.82□□□□□ -1.96
CTK2P46962 YLR334CYLR334C 381 nt2.82□□□□□ -1.96
CTK2P46962 snR54snR54 86 nt2.82□□□□□ -1.96
CTK2P46962 DNM1YLL001W 2274 nt2.82□□□□□ -1.96
CTK2P46962 POM152YMR129W 4014 nt2.82□□□□□ -1.96
CTK2P46962 NET1YJL076W 3570 nt2.81□□□□□ -1.96
CTK2P46962 FAR1YJL157C 2493 nt2.81□□□□□ -1.96
CTK2P46962 MET10YFR030W 3108 nt2.81□□□□□ -1.96
CTK2P46962 HSP10YOR020C 321 nt2.81□□□□□ -1.96
CTK2P46962 SPE1YKL184W 1401 nt2.81□□□□□ -1.96
CTK2P46962 YMR018WYMR018W 1545 nt2.81□□□□□ -1.96
CTK2P46962 YAT2YER024W 2772 nt2.81□□□□□ -1.96
CTK2P46962 YSP2YDR326C 4317 nt2.8□□□□□ -1.96
CTK2P46962 CWC22YGR278W 1734 nt2.8□□□□□ -1.96
CTK2P46962 TCP1YDR212W 1680 nt2.8□□□□□ -1.96
CTK2P46962 BET3YKR068C 582 nt2.8□□□□□ -1.96
CTK2P46962 RPL8BYLL045C 771 nt2.8□□□□□ -1.96
CTK2P46962 YLR101CYLR101C 396 nt2.8□□□□□ -1.96
CTK2P46962 TIF11YMR260C 462 nt2.8□□□□□ -1.96
CTK2P46962 LEE1YPL054W 906 nt2.8□□□□□ -1.96
CTK2P46962 YPL261CYPL261C 309 nt2.8□□□□□ -1.96
CTK2P46962 YTA7YGR270W 4140 nt2.8□□□□□ -1.96
CTK2P46962 VTC4YJL012C 2166 nt2.8□□□□□ -1.96
CTK2P46962 CIN8YEL061C 3003 nt2.79□□□□□ -1.96
CTK2P46962 SNF12YNR023W 1701 nt2.79□□□□□ -1.96
CTK2P46962 RGR1YLR071C 3249 nt2.79□□□□□ -1.96
CTK2P46962 YHR080CYHR080C 4038 nt2.79□□□□□ -1.96
CTK2P46962 GIM4YEL003W 336 nt2.79□□□□□ -1.96
CTK2P46962 tK(UUU)DtK(UUU)D 73 nt2.79□□□□□ -1.96
CTK2P46962 tK(UUU)G1tK(UUU)G1 73 nt2.79□□□□□ -1.96
CTK2P46962 tK(UUU)G2tK(UUU)G2 73 nt2.79□□□□□ -1.96
CTK2P46962 tK(UUU)KtK(UUU)K 73 nt2.79□□□□□ -1.96
CTK2P46962 tK(UUU)LtK(UUU)L 73 nt2.79□□□□□ -1.96
CTK2P46962 tK(UUU)OtK(UUU)O 73 nt2.79□□□□□ -1.96
CTK2P46962 tK(UUU)PtK(UUU)P 73 nt2.79□□□□□ -1.96
CTK2P46962 RAD6YGL058W 519 nt2.79□□□□□ -1.96
CTK2P46962 YIL054WYIL054W 318 nt2.79□□□□□ -1.96
CTK2P46962 VPH2YKL119C 648 nt2.79□□□□□ -1.96
CTK2P46962 YMR001C-AYMR001C-A 231 nt2.79□□□□□ -1.96
CTK2P46962 UTP13YLR222C 2454 nt2.79□□□□□ -1.96
CTK2P46962 BMS1YPL217C 3552 nt2.79□□□□□ -1.96
CTK2P46962 YMR317WYMR317W 3423 nt2.78□□□□□ -1.96
CTK2P46962 YLR001CYLR001C 2589 nt2.78□□□□□ -1.96
CTK2P46962 SIP3YNL257C 3690 nt2.78□□□□□ -1.96
CTK2P46962 YCR064CYCR064C 411 nt2.78□□□□□ -1.96
CTK2P46962 YER006C-AYER006C-A 318 nt2.78□□□□□ -1.96
CTK2P46962 IES5YER092W 378 nt2.78□□□□□ -1.96
CTK2P46962 RPL29YFR032C-A 180 nt2.78□□□□□ -1.96
CTK2P46962 YMR31YFR049W 372 nt2.78□□□□□ -1.96
CTK2P46962 RMP1YLR145W 606 nt2.78□□□□□ -1.96
CTK2P46962 YPL080CYPL080C 327 nt2.78□□□□□ -1.96
CTK2P46962 MSS18YPR134W 807 nt2.78□□□□□ -1.96
CTK2P46962 FUS1YCL027W 1539 nt2.78□□□□□ -1.97
CTK2P46962 TIM11YDR322C-A 291 nt2.77□□□□□ -1.97
CTK2P46962 SMB1YER029C 591 nt2.77□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms