Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC16.85■□□□□ 0.29
NKX2-1P43699 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NKX2-1P43699 AC010525.1-201ENST00000585559 441 ntBASIC16.85■□□□□ 0.29
NKX2-1P43699 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.85■□□□□ 0.29
NKX2-1P43699 AC099778.1-201ENST00000568593 1911 ntBASIC16.85■□□□□ 0.29
NKX2-1P43699 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NKX2-1P43699 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.85■□□□□ 0.29
NKX2-1P43699 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.85■□□□□ 0.29
NKX2-1P43699 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NKX2-1P43699 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-1P43699 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-1P43699 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.85■□□□□ 0.29
NKX2-1P43699 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-1P43699 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-1P43699 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.85■□□□□ 0.29
NKX2-1P43699 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-1P43699 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-1P43699 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-1P43699 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
NKX2-1P43699 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
NKX2-1P43699 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NKX2-1P43699 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-1P43699 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NKX2-1P43699 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-1P43699 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-1P43699 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-1P43699 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.84■□□□□ 0.29
NKX2-1P43699 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-1P43699 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-1P43699 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-1P43699 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-1P43699 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
NKX2-1P43699 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.84■□□□□ 0.29
NKX2-1P43699 SMG8-203ENST00000578922 2178 ntBASIC16.84■□□□□ 0.29
NKX2-1P43699 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NKX2-1P43699 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
NKX2-1P43699 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-1P43699 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-1P43699 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-1P43699 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-1P43699 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-1P43699 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-1P43699 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.83■□□□□ 0.28
NKX2-1P43699 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-1P43699 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.83■□□□□ 0.28
NKX2-1P43699 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.83■□□□□ 0.28
NKX2-1P43699 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-1P43699 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NKX2-1P43699 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-1P43699 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.83■□□□□ 0.28
NKX2-1P43699 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-1P43699 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NKX2-1P43699 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.83■□□□□ 0.28
NKX2-1P43699 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-1P43699 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-1P43699 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NKX2-1P43699 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-1P43699 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.82■□□□□ 0.28
NKX2-1P43699 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX2-1P43699 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-1P43699 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-1P43699 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.82■□□□□ 0.28
NKX2-1P43699 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NKX2-1P43699 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-1P43699 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NKX2-1P43699 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-1P43699 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-1P43699 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-1P43699 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.82■□□□□ 0.28
NKX2-1P43699 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-1P43699 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NKX2-1P43699 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX2-1P43699 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-1P43699 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-1P43699 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-1P43699 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX2-1P43699 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NKX2-1P43699 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-1P43699 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.82■□□□□ 0.28
NKX2-1P43699 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NKX2-1P43699 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NKX2-1P43699 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-1P43699 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NKX2-1P43699 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NKX2-1P43699 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-1P43699 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-1P43699 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-1P43699 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-1P43699 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.81■□□□□ 0.28
NKX2-1P43699 AL035685.1-201ENST00000636663 812 ntBASIC16.81■□□□□ 0.28
NKX2-1P43699 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
NKX2-1P43699 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-1P43699 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.81■□□□□ 0.28
NKX2-1P43699 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NKX2-1P43699 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.81■□□□□ 0.28
NKX2-1P43699 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.81■□□□□ 0.28
NKX2-1P43699 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.81■□□□□ 0.28
NKX2-1P43699 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NKX2-1P43699 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NKX2-1P43699 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms