Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 DSF2YBR007C 2211 nt3.39□□□□□ -1.87
TDP1P38319 YDR090CYDR090C 933 nt3.39□□□□□ -1.87
TDP1P38319 YDR194W-AYDR194W-A 153 nt3.39□□□□□ -1.87
TDP1P38319 COX19YLL018C-A 297 nt3.39□□□□□ -1.87
TDP1P38319 ZEO1YOL109W 342 nt3.39□□□□□ -1.87
TDP1P38319 RRD2YPL152W 1077 nt3.39□□□□□ -1.87
TDP1P38319 YPR053CYPR053C 456 nt3.39□□□□□ -1.87
TDP1P38319 SMC3YJL074C 3693 nt3.39□□□□□ -1.87
TDP1P38319 ZDS2YML109W 2829 nt3.39□□□□□ -1.87
TDP1P38319 SYT1YPR095C 3681 nt3.39□□□□□ -1.87
TDP1P38319 UTP15YMR093W 1542 nt3.39□□□□□ -1.87
TDP1P38319 RPA135YPR010C 3612 nt3.38□□□□□ -1.87
TDP1P38319 BMS1YPL217C 3552 nt3.38□□□□□ -1.87
TDP1P38319 AIM11YER093C-A 414 nt3.38□□□□□ -1.87
TDP1P38319 RTT105YER104W 627 nt3.38□□□□□ -1.87
TDP1P38319 MRPL50YNR022C 420 nt3.38□□□□□ -1.87
TDP1P38319 YPL276WYPL276W 438 nt3.38□□□□□ -1.87
TDP1P38319 TCB3YML072C 4638 nt3.38□□□□□ -1.87
TDP1P38319 RNR1YER070W 2667 nt3.38□□□□□ -1.87
TDP1P38319 CIN1YOR349W 3045 nt3.38□□□□□ -1.87
TDP1P38319 MDN1YLR106C 14733 nt3.38□□□□□ -1.87
TDP1P38319 YLR177WYLR177W 1887 nt3.37□□□□□ -1.87
TDP1P38319 YDL176WYDL176W 2127 nt3.37□□□□□ -1.87
TDP1P38319 EMI1YDR512C 564 nt3.37□□□□□ -1.87
TDP1P38319 IES6YEL044W 501 nt3.37□□□□□ -1.87
TDP1P38319 YER039C-AYER039C-A 219 nt3.37□□□□□ -1.87
TDP1P38319 LAG1YHL003C 1236 nt3.37□□□□□ -1.87
TDP1P38319 YMR316C-AYMR316C-A 312 nt3.37□□□□□ -1.87
TDP1P38319 YAK1YJL141C 2424 nt3.36□□□□□ -1.87
TDP1P38319 PFK26YIL107C 2484 nt3.36□□□□□ -1.87
TDP1P38319 YDR102CYDR102C 333 nt3.36□□□□□ -1.87
TDP1P38319 YFL032WYFL032W 321 nt3.36□□□□□ -1.87
TDP1P38319 BCD1YHR040W 1101 nt3.36□□□□□ -1.87
TDP1P38319 YAL031W-AYAL031W-A 309 nt3.36□□□□□ -1.87
TDP1P38319 COX7YMR256C 183 nt3.36□□□□□ -1.87
TDP1P38319 PEX11YOL147C 711 nt3.36□□□□□ -1.87
TDP1P38319 YOR192C-CYOR192C-C 237 nt3.36□□□□□ -1.87
TDP1P38319 YRR1YOR162C 2433 nt3.36□□□□□ -1.87
TDP1P38319 MUB1YMR100W 1863 nt3.36□□□□□ -1.87
TDP1P38319 RRP5YMR229C 5190 nt3.36□□□□□ -1.87
TDP1P38319 RED1YLR263W 2484 nt3.35□□□□□ -1.87
TDP1P38319 PEX5YDR244W 1839 nt3.35□□□□□ -1.87
TDP1P38319 YJR003CYJR003C 1560 nt3.35□□□□□ -1.87
TDP1P38319 SEC15YGL233W 2733 nt3.35□□□□□ -1.87
TDP1P38319 RPS0AYGR214W 759 nt3.35□□□□□ -1.87
TDP1P38319 YIL046W-AYIL046W-A 165 nt3.35□□□□□ -1.87
TDP1P38319 GIS2YNL255C 462 nt3.35□□□□□ -1.87
TDP1P38319 YPR077CYPR077C 372 nt3.35□□□□□ -1.87
TDP1P38319 ROY1YMR258C 1662 nt3.35□□□□□ -1.87
TDP1P38319 YEL025CYEL025C 3567 nt3.35□□□□□ -1.87
TDP1P38319 RAD4YER162C 2265 nt3.35□□□□□ -1.87
TDP1P38319 YPR022CYPR022C 3402 nt3.34□□□□□ -1.87
TDP1P38319 YBR259WYBR259W 2067 nt3.34□□□□□ -1.87
TDP1P38319 RIM13YMR154C 2184 nt3.34□□□□□ -1.87
TDP1P38319 MPS1YDL028C 2295 nt3.34□□□□□ -1.87
TDP1P38319 YDL068WYDL068W 330 nt3.34□□□□□ -1.87
TDP1P38319 YGL165CYGL165C 579 nt3.34□□□□□ -1.87
TDP1P38319 YPS5YGL259W 498 nt3.34□□□□□ -1.87
TDP1P38319 MVB12YGR206W 306 nt3.34□□□□□ -1.87
TDP1P38319 TMA19YKL056C 504 nt3.34□□□□□ -1.87
TDP1P38319 YMR294W-AYMR294W-A 360 nt3.34□□□□□ -1.87
TDP1P38319 RPN2YIL075C 2838 nt3.34□□□□□ -1.87
TDP1P38319 SLA1YBL007C 3735 nt3.34□□□□□ -1.88
TDP1P38319 VTC4YJL012C 2166 nt3.34□□□□□ -1.88
TDP1P38319 AUS1YOR011W 4185 nt3.33□□□□□ -1.88
TDP1P38319 YNL193WYNL193W 1677 nt3.33□□□□□ -1.88
TDP1P38319 MIT1YEL007W 2001 nt3.33□□□□□ -1.88
TDP1P38319 SNA4YDL123W 423 nt3.33□□□□□ -1.88
TDP1P38319 PSF1YDR013W 627 nt3.33□□□□□ -1.88
TDP1P38319 SGN1YIR001C 753 nt3.33□□□□□ -1.88
TDP1P38319 AIM26YKL037W 357 nt3.33□□□□□ -1.88
TDP1P38319 PEX17YNL214W 600 nt3.33□□□□□ -1.88
TDP1P38319 RSM19YNR037C 276 nt3.33□□□□□ -1.88
TDP1P38319 TIM18YOR297C 579 nt3.33□□□□□ -1.88
TDP1P38319 TSC3YBR058C-A 243 nt3.33□□□□□ -1.88
TDP1P38319 STE5YDR103W 2754 nt3.33□□□□□ -1.88
TDP1P38319 RNH70YGR276C 1662 nt3.33□□□□□ -1.88
TDP1P38319 HBT1YDL223C 3141 nt3.33□□□□□ -1.88
TDP1P38319 GLC3YEL011W 2115 nt3.32□□□□□ -1.88
TDP1P38319 SNT1YCR033W 3681 nt3.32□□□□□ -1.88
TDP1P38319 YER038W-AYER038W-A 381 nt3.32□□□□□ -1.88
TDP1P38319 YFR054CYFR054C 579 nt3.32□□□□□ -1.88
TDP1P38319 YHR007C-AYHR007C-A 216 nt3.32□□□□□ -1.88
TDP1P38319 RPL39YJL189W 156 nt3.32□□□□□ -1.88
TDP1P38319 RPL15AYLR029C 615 nt3.32□□□□□ -1.88
TDP1P38319 TVP18YMR071C 504 nt3.32□□□□□ -1.88
TDP1P38319 RPS7AYOR096W 573 nt3.32□□□□□ -1.88
TDP1P38319 OSH6YKR003W 1347 nt3.32□□□□□ -1.88
TDP1P38319 NUP60YAR002W 1620 nt3.32□□□□□ -1.88
TDP1P38319 SKN7YHR206W 1869 nt3.32□□□□□ -1.88
TDP1P38319 EAP1YKL204W 1899 nt3.32□□□□□ -1.88
TDP1P38319 TIF4631YGR162W 2859 nt3.32□□□□□ -1.88
TDP1P38319 PWP2YCR057C 2772 nt3.31□□□□□ -1.88
TDP1P38319 VBA4YDR119W 2307 nt3.31□□□□□ -1.88
TDP1P38319 MUS81YDR386W 1899 nt3.31□□□□□ -1.88
TDP1P38319 YDR061WYDR061W 1620 nt3.31□□□□□ -1.88
TDP1P38319 YER107W-AYER107W-A 321 nt3.31□□□□□ -1.88
TDP1P38319 YGR107WYGR107W 450 nt3.31□□□□□ -1.88
TDP1P38319 RPS21AYKR057W 264 nt3.31□□□□□ -1.88
TDP1P38319 YAL064W-BYAL064W-B 381 nt3.31□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 11.6 ms