Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 RPO21YDL140C 5202 nt4.04□□□□□ -1.76
MSH3P25336 SRB4YER022W 2064 nt4.04□□□□□ -1.76
MSH3P25336 CWH41YGL027C 2502 nt4.03□□□□□ -1.76
MSH3P25336 YLR001CYLR001C 2589 nt4.03□□□□□ -1.76
MSH3P25336 YGR107WYGR107W 450 nt4.03□□□□□ -1.76
MSH3P25336 RPL39YJL189W 156 nt4.03□□□□□ -1.76
MSH3P25336 YMR290W-AYMR290W-A 348 nt4.03□□□□□ -1.76
MSH3P25336 YMR320WYMR320W 306 nt4.03□□□□□ -1.76
MSH3P25336 HHT2YNL031C 411 nt4.03□□□□□ -1.76
MSH3P25336 BIL1YOR304C-A 231 nt4.03□□□□□ -1.76
MSH3P25336 EMP70YLR083C 2004 nt4.03□□□□□ -1.76
MSH3P25336 NSP1YJL041W 2472 nt4.03□□□□□ -1.76
MSH3P25336 NRP1YDL167C 2160 nt4.03□□□□□ -1.76
MSH3P25336 SEA4YBL104C 3117 nt4.03□□□□□ -1.76
MSH3P25336 RRT13YER066W 558 nt4.02□□□□□ -1.77
MSH3P25336 YFL032WYFL032W 321 nt4.02□□□□□ -1.77
MSH3P25336 URA10YMR271C 684 nt4.02□□□□□ -1.77
MSH3P25336 PFY1YOR122C 381 nt4.02□□□□□ -1.77
MSH3P25336 YPL039WYPL039W 951 nt4.02□□□□□ -1.77
MSH3P25336 YPL276WYPL276W 438 nt4.02□□□□□ -1.77
MSH3P25336 FRE8YLR047C 2061 nt4.02□□□□□ -1.77
MSH3P25336 TAF1YGR274C 3201 nt4.02□□□□□ -1.77
MSH3P25336 CBP2YHL038C 1893 nt4.01□□□□□ -1.77
MSH3P25336 KAP95YLR347C 2586 nt4.01□□□□□ -1.77
MSH3P25336 PHM6YDR281C 315 nt4.01□□□□□ -1.77
MSH3P25336 ATP17YDR377W 306 nt4.01□□□□□ -1.77
MSH3P25336 YGR073CYGR073C 372 nt4.01□□□□□ -1.77
MSH3P25336 YAL004WYAL004W 648 nt4.01□□□□□ -1.77
MSH3P25336 DGK1YOR311C 873 nt4.01□□□□□ -1.77
MSH3P25336 YPR010C-AYPR010C-A 219 nt4.01□□□□□ -1.77
MSH3P25336 TCB3YML072C 4638 nt4□□□□□ -1.77
MSH3P25336 RPS0AYGR214W 759 nt4□□□□□ -1.77
MSH3P25336 RPL19BYBL027W 570 nt4□□□□□ -1.77
MSH3P25336 TIM18YOR297C 579 nt4□□□□□ -1.77
MSH3P25336 MPS1YDL028C 2295 nt4□□□□□ -1.77
MSH3P25336 BAR1YIL015W 1764 nt3.99□□□□□ -1.77
MSH3P25336 FLO9YAL063C 3969 nt3.99□□□□□ -1.77
MSH3P25336 STE5YDR103W 2754 nt3.99□□□□□ -1.77
MSH3P25336 VID27YNL212W 2349 nt3.99□□□□□ -1.77
MSH3P25336 YDR133CYDR133C 336 nt3.99□□□□□ -1.77
MSH3P25336 YKL156C-AYKL156C-A 117 nt3.99□□□□□ -1.77
MSH3P25336 RDS1YCR106W 2499 nt3.99□□□□□ -1.77
MSH3P25336 YDR089WYDR089W 2610 nt3.98□□□□□ -1.77
MSH3P25336 KIN82YCR091W 2163 nt3.98□□□□□ -1.77
MSH3P25336 BMS1YPL217C 3552 nt3.98□□□□□ -1.77
MSH3P25336 RPL29YFR032C-A 180 nt3.98□□□□□ -1.77
MSH3P25336 YIL012WYIL012W 342 nt3.98□□□□□ -1.77
MSH3P25336 YBL108WYBL108W 306 nt3.98□□□□□ -1.77
MSH3P25336 snR36snR36 182 nt3.98□□□□□ -1.77
MSH3P25336 SLM6YBR266C 453 nt3.98□□□□□ -1.77
MSH3P25336 YKL050CYKL050C 2769 nt3.97□□□□□ -1.77
MSH3P25336 CAF130YGR134W 3369 nt3.97□□□□□ -1.77
MSH3P25336 GCN4YEL009C 846 nt3.97□□□□□ -1.77
MSH3P25336 ERG28YER044C 447 nt3.97□□□□□ -1.77
MSH3P25336 YER076W-AYER076W-A 348 nt3.97□□□□□ -1.77
MSH3P25336 tM(CAU)Q1tM(CAU)Q1 76 nt3.97□□□□□ -1.77
MSH3P25336 UTP30YKR060W 825 nt3.97□□□□□ -1.77
MSH3P25336 LSM2YBL026W 288 nt3.97□□□□□ -1.77
MSH3P25336 RPS7BYNL096C 573 nt3.97□□□□□ -1.77
MSH3P25336 TIR2YOR010C 756 nt3.97□□□□□ -1.77
MSH3P25336 FUN12YAL035W 3009 nt3.97□□□□□ -1.77
MSH3P25336 MES1YGR264C 2256 nt3.96□□□□□ -1.78
MSH3P25336 GPI8YDR331W 1236 nt3.96□□□□□ -1.78
MSH3P25336 RPL1BYGL135W 654 nt3.96□□□□□ -1.78
MSH3P25336 YIR040CYIR040C 333 nt3.96□□□□□ -1.78
MSH3P25336 PET191YJR034W 327 nt3.96□□□□□ -1.78
MSH3P25336 JLP2YMR132C 627 nt3.96□□□□□ -1.78
MSH3P25336 RPL1AYPL220W 654 nt3.96□□□□□ -1.78
MSH3P25336 RED1YLR263W 2484 nt3.96□□□□□ -1.78
MSH3P25336 AIP1YMR092C 1848 nt3.95□□□□□ -1.78
MSH3P25336 SQS1YNL224C 2304 nt3.95□□□□□ -1.78
MSH3P25336 MSD1YPL104W 1977 nt3.95□□□□□ -1.78
MSH3P25336 YHR139C-AYHR139C-A 312 nt3.95□□□□□ -1.78
MSH3P25336 SPT10YJL127C 1923 nt3.95□□□□□ -1.78
MSH3P25336 RRN6YBL014C 2685 nt3.95□□□□□ -1.78
MSH3P25336 COP1YDL145C 3606 nt3.95□□□□□ -1.78
MSH3P25336 SMI1YGR229C 1518 nt3.95□□□□□ -1.78
MSH3P25336 SLM2YNL047C 1971 nt3.94□□□□□ -1.78
MSH3P25336 ALY1YKR021W 2748 nt3.94□□□□□ -1.78
MSH3P25336 SPT16YGL207W 3108 nt3.94□□□□□ -1.78
MSH3P25336 AAD3YCR107W 1092 nt3.94□□□□□ -1.78
MSH3P25336 NOP19YGR251W 591 nt3.94□□□□□ -1.78
MSH3P25336 SHE2YKL130C 741 nt3.94□□□□□ -1.78
MSH3P25336 COX19YLL018C-A 297 nt3.94□□□□□ -1.78
MSH3P25336 RPL15AYLR029C 615 nt3.94□□□□□ -1.78
MSH3P25336 TVP18YMR071C 504 nt3.94□□□□□ -1.78
MSH3P25336 RPB11YOL005C 363 nt3.94□□□□□ -1.78
MSH3P25336 ATP22YDR350C 2055 nt3.94□□□□□ -1.78
MSH3P25336 SPC72YAL047C 1869 nt3.94□□□□□ -1.78
MSH3P25336 YKL100CYKL100C 1764 nt3.94□□□□□ -1.78
MSH3P25336 ATG26YLR189C 3597 nt3.93□□□□□ -1.78
MSH3P25336 YSW1YBR148W 1830 nt3.93□□□□□ -1.78
MSH3P25336 SMT3YDR510W 306 nt3.93□□□□□ -1.78
MSH3P25336 YEL018C-AYEL018C-A 534 nt3.93□□□□□ -1.78
MSH3P25336 YER066C-AYER066C-A 501 nt3.93□□□□□ -1.78
MSH3P25336 RAD6YGL058W 519 nt3.93□□□□□ -1.78
MSH3P25336 POG1YIL122W 1056 nt3.93□□□□□ -1.78
MSH3P25336 SGN1YIR001C 753 nt3.93□□□□□ -1.78
MSH3P25336 YLR031WYLR031W 561 nt3.93□□□□□ -1.78
MSH3P25336 JJJ2YJL162C 1752 nt3.93□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 31.4 ms