Protein–RNA interactions for Protein: P0C0S8

HIST1H2AG, Histone H2A type 1, humanhuman

Predicted RBP Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AGP0C0S8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
HIST1H2AGP0C0S8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H2AGP0C0S8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.19■□□□□ 0.82
HIST1H2AGP0C0S8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H2AGP0C0S8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H2AGP0C0S8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.19■□□□□ 0.82
HIST1H2AGP0C0S8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H2AGP0C0S8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.19■□□□□ 0.82
HIST1H2AGP0C0S8 KRT18P61-201ENST00000585825 1298 ntBASIC20.19■□□□□ 0.82
HIST1H2AGP0C0S8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.19■□□□□ 0.82
HIST1H2AGP0C0S8 MIR5787-201ENST00000611784 55 ntBASIC20.19■□□□□ 0.82
HIST1H2AGP0C0S8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H2AGP0C0S8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H2AGP0C0S8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H2AGP0C0S8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
HIST1H2AGP0C0S8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIST1H2AGP0C0S8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 KRT18P11-201ENST00000435214 1283 ntBASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 KRT18P5-201ENST00000436075 1291 ntBASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 UBE2DNL-204ENST00000602536 740 ntBASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HIST1H2AGP0C0S8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 AC243732.1-201ENST00000612648 864 ntBASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.17■□□□□ 0.82
HIST1H2AGP0C0S8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 AC116050.2-201ENST00000612102 1779 ntBASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 AC137761.2-201ENST00000561729 223 ntBASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 AC145350.3-201ENST00000569033 163 ntBASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 MYCNOS-205ENST00000641950 531 ntBASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HIST1H2AGP0C0S8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
HIST1H2AGP0C0S8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.15■□□□□ 0.82
HIST1H2AGP0C0S8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H2AGP0C0S8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H2AGP0C0S8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HIST1H2AGP0C0S8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.15■□□□□ 0.82
HIST1H2AGP0C0S8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms