Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MT-ND3P03897 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MT-ND3P03897 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MT-ND3P03897 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MT-ND3P03897 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MT-ND3P03897 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MT-ND3P03897 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.93■□□□□ 0.94
MT-ND3P03897 MIR6084-201ENST00000622012 110 ntBASIC20.93■□□□□ 0.94
MT-ND3P03897 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.93■□□□□ 0.94
MT-ND3P03897 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.93■□□□□ 0.94
MT-ND3P03897 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
MT-ND3P03897 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.93■□□□□ 0.94
MT-ND3P03897 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MT-ND3P03897 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MT-ND3P03897 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MT-ND3P03897 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
MT-ND3P03897 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MT-ND3P03897 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
MT-ND3P03897 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MT-ND3P03897 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MT-ND3P03897 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MT-ND3P03897 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
MT-ND3P03897 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.92■□□□□ 0.94
MT-ND3P03897 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.92■□□□□ 0.94
MT-ND3P03897 KRT18P5-201ENST00000436075 1291 ntBASIC20.92■□□□□ 0.94
MT-ND3P03897 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MT-ND3P03897 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MT-ND3P03897 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.92■□□□□ 0.94
MT-ND3P03897 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MT-ND3P03897 LINC02228-203ENST00000641970 1355 ntBASIC20.92■□□□□ 0.94
MT-ND3P03897 AL391422.3-201ENST00000603791 2761 ntBASIC20.92■□□□□ 0.94
MT-ND3P03897 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MT-ND3P03897 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.92■□□□□ 0.94
MT-ND3P03897 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.92■□□□□ 0.94
MT-ND3P03897 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
MT-ND3P03897 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
MT-ND3P03897 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MT-ND3P03897 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.92■□□□□ 0.94
MT-ND3P03897 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MT-ND3P03897 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
MT-ND3P03897 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MT-ND3P03897 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.92■□□□□ 0.94
MT-ND3P03897 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MT-ND3P03897 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MT-ND3P03897 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
MT-ND3P03897 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
MT-ND3P03897 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.91■□□□□ 0.94
MT-ND3P03897 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MT-ND3P03897 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MT-ND3P03897 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MT-ND3P03897 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MT-ND3P03897 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
MT-ND3P03897 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.91■□□□□ 0.94
MT-ND3P03897 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
MT-ND3P03897 DUX4L2-201ENST00000561772 1275 ntBASIC20.91■□□□□ 0.94
MT-ND3P03897 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.91■□□□□ 0.94
MT-ND3P03897 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
MT-ND3P03897 DUX4L6-201ENST00000626483 1275 ntBASIC20.91■□□□□ 0.94
MT-ND3P03897 DUX4L1-201ENST00000627662 1275 ntBASIC20.91■□□□□ 0.94
MT-ND3P03897 DUX4L8-201ENST00000629013 1275 ntBASIC20.91■□□□□ 0.94
MT-ND3P03897 DUX4L3-201ENST00000630187 1275 ntBASIC20.91■□□□□ 0.94
MT-ND3P03897 DUX4L7-201ENST00000630678 1275 ntBASIC20.91■□□□□ 0.94
MT-ND3P03897 DUX4L5-201ENST00000630834 1275 ntBASIC20.91■□□□□ 0.94
MT-ND3P03897 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
MT-ND3P03897 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.9■□□□□ 0.94
MT-ND3P03897 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
MT-ND3P03897 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MT-ND3P03897 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
MT-ND3P03897 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MT-ND3P03897 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.9■□□□□ 0.94
MT-ND3P03897 AC027702.1-201ENST00000563810 1770 ntBASIC20.9■□□□□ 0.94
MT-ND3P03897 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
MT-ND3P03897 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.9■□□□□ 0.94
MT-ND3P03897 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MT-ND3P03897 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MT-ND3P03897 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.9■□□□□ 0.94
MT-ND3P03897 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.9■□□□□ 0.94
MT-ND3P03897 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MT-ND3P03897 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MT-ND3P03897 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.9■□□□□ 0.94
MT-ND3P03897 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.9■□□□□ 0.94
MT-ND3P03897 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.9■□□□□ 0.94
MT-ND3P03897 AL137784.2-201ENST00000607332 1000 ntBASIC20.9■□□□□ 0.94
MT-ND3P03897 AC105233.4-201ENST00000642045 216 ntBASIC20.9■□□□□ 0.94
MT-ND3P03897 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.9■□□□□ 0.94
MT-ND3P03897 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
MT-ND3P03897 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MT-ND3P03897 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MT-ND3P03897 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MT-ND3P03897 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
MT-ND3P03897 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MT-ND3P03897 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
MT-ND3P03897 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
MT-ND3P03897 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
MT-ND3P03897 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MT-ND3P03897 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.89■□□□□ 0.93
MT-ND3P03897 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
MT-ND3P03897 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
MT-ND3P03897 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.89■□□□□ 0.93
MT-ND3P03897 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms